| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1354373 = | 56 (0.950) | 3 (0.050) | 3/246 | NT | 5.3% | coding (1004/2880 nt) | nrdA | ribonucleoside‑diphosphate reductase subunit alpha |
| ? | NC_002947 | 1354416 = | 55 (0.990) | coding (961/2880 nt) | nrdA | ribonucleoside‑diphosphate reductase subunit alpha | |||||
GGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1354527‑1354373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagaaaaCCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAGGGCCGG > NC_002947/1354416‑1354560 GGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAATGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGA < 5:209216/149‑1GGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGG < 7:25039/148‑1 GCAAGGCGATCAACCACGAGCGCGACCAGCAGCTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTACTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAA < 1:55466/149‑1 GATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAA > 7:227414/1‑146 GGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATC > 1:78830/1‑149 GTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGAACAGGGTCTGCAGGCCAAGGTAGGTAAACTGCTGGTCGCGCTCGAGGTTTATag > 5:22139/1‑147 TCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTT > 6:162879/1‑149 GAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCATTCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAGG > 1:49321/1‑149 GAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAG < 5:162879/147‑1 AGAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAGGGCC > 3:133152/1‑149 AGAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAGGGCC > 7:206073/1‑149 GAAAACCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAGGGCCG < 8:38342/149‑1 AAACCTTCGGCATCTCGAACCGCACGCCA‑TCCTTGTTGATTAACTAGCGGTCGTACATGGTCTGCATGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTTCTCCAGGTCGAAGTCGGCCAGGGCCGG < 1:191449/149‑1 GGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1354527‑1354373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagaaaaCCTGCGGCAGCTCGAAGCGCACGCCA‑TCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTT‑TCCAGGTCGAAGTCGGCCAGGGCCGG > NC_002947/1354416‑1354560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |