New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1375310 | 63 (1.070) | 4 (0.070) | 4/254 | NT | 6.2% | coding (930/1911 nt) | kup | potassium transport system protein Kup |
? | NC_002947 | = 1375342 | 60 (1.050) | coding (962/1911 nt) | kup | potassium transport system protein Kup |
CTGGTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1375160‑1375310 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT < NC_002947/1375342‑1375195 CTGGTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGG < 2:340951/149‑1 GTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCGTTGCTGCTGCAAAACCCGGAGCCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCC > 3:125939/1‑149 TCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACC > 7:309321/1‑149 GGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGT < 8:309321/149‑1 CGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATG < 7:166119/119‑1 CGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATG > 8:166119/1‑119 CCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT > 3:149244/1‑149 CCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT > 5:152130/1‑149 CCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT > 8:43038/1‑149 CTGGTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1375160‑1375310 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT < NC_002947/1375342‑1375195 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |