New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1436018 = | 59 (1.000) | 7 (0.130) | 7/246 | NT | 11.3% | intergenic (‑55/+98) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
? | NC_002947 | 1436095 = | 54 (0.980) | intergenic (‑132/+21) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
TACGCGCTGTTCCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1436172‑1436018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctccCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTGTACTCG > NC_002947/1436095‑1436242 TACGCGCTGTTCCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCACCGGTGTTCGCGGGTGAACC > 4:21294/1‑149 CCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCA > 8:13430/1‑149 ACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATA > 4:17384/1‑149 CTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTG > 7:284113/1‑143 CTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTG < 8:284113/143‑1 ATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGG‑ATTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCA > 8:141453/1‑148 GGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGGGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGA < 3:17384/149‑1 GCGGGTGAACCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAA < 7:13430/149‑1 CCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGTAGATGTTTTGCTCGGCAGACCAGATGGCATACCAGCTGCGGAACATAGCGTACTGCTGTTAGTCATAGTTTCGCTGAGCGTAGGTCAGGAAGTCGGTCTAGTTGAAGTGCAGGCTG > 6:101432/1‑149 CCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTG > 3:35240/1‑149 CCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTGTACTCG > 3:229816/1‑149 TACGCGCTGTTCCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1436172‑1436018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctccCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAACAGCGCGTACTGCTGTTCGGCATAGTTGCGCTGAGCGTCGGTCAGGACGTCGGTCTCGTTGAAGTGCAGGCTGTACTCG > NC_002947/1436095‑1436242 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |