| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1454366 | 61 (1.040) | 4 (0.070) | 4/250 | NT | 6.6% | coding (1000/1104 nt) | PP_1272 | multidrug MFS transporter membrane fusion protein |
| ? | NC_002947 | = 1454418 | 55 (0.980) | coding (1052/1104 nt) | PP_1272 | multidrug MFS transporter membrane fusion protein | |||||
GCGTCGACACCTTCTCCGGCGAAACCCTGCAAGGCCATGTGCAAAGCATTGCCCCGGCTACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1454214‑1454366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCATCGAGAACGATCTTGACCGGAATGCGCTGCACCACCTTGGTGAAGTTGCCGGTGGCGTTGTCTGGCTTGACTGCGGCGAAGGTGACGCCGG < NC_002947/1454418‑1454274 GCGTCGACACCTTCTCCGGCGAAACCCTGCAAGGCCATGTGCAAAGCATTGCCCCGGCTACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTC < 3:43681/149‑1GCGTCGACACCTTCTCCGGCGAAACCCTGCAAGGCCATGTGCAAAGCATTGCCCCGGCTACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTC > 4:72588/1‑149 TCGACACCTTCTCCGGCGAAACCCTGCAAGGCCATGTGCAAAGCATTGCCCCGGCTACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGAT < 2:229087/149‑1 TGCAAAGCATTGCCCCGGCTACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGATGGTGGCTTCGACCGACATGCCCACACGCAGGCGGGT > 7:158717/1‑149 ACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGATGGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCAT > 8:72952/1‑149 ACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGATGGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCATCGAGAACGA < 8:158717/149‑1 CCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGATGGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCATCGAGAACGATCTTGAC < 7:72952/149‑1 TCGATGGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCATCGAGAACGATCTTGACCGGAATGCGCTGCACCACCTTGGTGAAGTTGCCGGTGGCGTTGTCTGGCTTGACTGCGGCGAAGGTGACGC < 4:161785/148‑1 TGGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCATCGAGAACGATCTTGACCGGAATGCGCTGCACCACCTTGGTGAAGTTGCCGGTGGCGTTGTCTGGCTTGACTGCGGCGAAGGTGACGCCGG > 6:31430/1‑147 GCGTCGACACCTTCTCCGGCGAAACCCTGCAAGGCCATGTGCAAAGCATTGCCCCGGCTACCGGCGTCACCTTCGCCGCAGTCAAGCCAGACAACGCCACCGGCAACTTCACCAAGGTGGTGCAGCGCATTCCGGTCAAGATCGTTCTCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1454214‑1454366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgGTGGCTTCGACCGACATGCCCACACGCAGGCGGGTGAGCAGTGGCTGGCCATCATCGAGAACGATCTTGACCGGAATGCGCTGCACCACCTTGGTGAAGTTGCCGGTGGCGTTGTCTGGCTTGACTGCGGCGAAGGTGACGCCGG < NC_002947/1454418‑1454274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |