New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1559988 = | 64 (1.090) | 8 (0.140) | 8/250 | NT | 11.6% | coding (60/1122 nt) | PP_1370 | group 1 family glycosyl transferase |
? | NC_002947 | 1560012 = | 61 (1.090) | coding (36/1122 nt) | PP_1370 | group 1 family glycosyl transferase |
GAACAAACTATCCTTCTGATAGGTCCACCTTTAGGCATTTCATCGCCGGCAATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCCCGGCCAGCGGTGGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1560139‑1559988 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtaGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCGTTGAATTGCCGGCGATGAAATGCCTAAAGGTGGACCTATCAGAAGGATAGTTTGTTCGATCGGTTTGAGAGGAGGG > NC_002947/1560012‑1560158 GAACAAACTATCCTTCTGATAGGTCCACCTTTAGGCATTTCATCGCCGGCAATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCCCGGCCAGCGGTGGC > 8:207775/1‑149 GAACAAACTATCCTTCTGATAGGTCCACCTTTAGGCATTTCATCGCCGGCAATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCCCGGCCAGCGGTGG < 2:30990/148‑1 AACAAACTATCCTTCTGATAGGTCCACCTTTAGGCATTTCATCGCCGGCAATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCCCGGCCAGCGGTGGCG > 2:307169/1‑149 ACAAACTATCCTTCTGATAGGTCCACCTTTAGGCATTTCATCGCCGGCAATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCCCGGCCAGCGGTGGCG > 1:94065/1‑148 ATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCACCGCTGGCCGGGGCGTAGAACATGGTGAT < 1:46724/113‑1 ATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCACCGCTGGCCGGGGCGTAGAACATGGTGAT > 2:46724/1‑113 AACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTTCGCCACCGCTGGCCGGGGCGTAGAACATG < 1:28283/104‑1 AACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCACCGCTGGCCGGGGCGTAGAACATG > 2:28283/1‑104 TGTTCTACGCCCCGGCCAGCGGTGGCGTAGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCG < 3:232000/100‑1 TGTTCTACGCCCCGGCCAGCGGTGGCGTAGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGAATCGTCTTCGGGTCTGTCATCCGGCG > 4:232000/1‑100 TCTACGCCCCGGCCAGCGGTGGCGTAGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCGTTGAATTGCCGGCGATGAAATGCCTAAAGGTGGACCTATCAGAAGGATAGTT > 4:149597/1‑149 CCCGGCCAGCGGTGGCGTAGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCGTTGAATTGCCGGCGATGAAATGCCTAAAGGTGGACCTATCAGAAGGATAGTTTGTTCGA > 3:303107/1‑149 GCGTAGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCGTTGAATTGCCGGCGATGAAATGCCTAAAGGTGGACCTATCAGAAGGATAGTTTGTTCGATCGGTTTGAGAGGA < 5:225755/149‑1 TAGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCGTTGAATTGCCGGCGATGAAATGCCTAAAGGTGGACCTATCAGAAGGATAGTTTGTTCGATCGGTTTGAGAGGAGGG < 2:369286/149‑1 GAACAAACTATCCTTCTGATAGGTCCACCTTTAGGCATTTCATCGCCGGCAATTCAACGCCGGATGACAGACCCGAAGACGATCCCGGAGGGATGCTGATCGTGCACATCGCCGACATCACCATGTTCTACGCCCCGGCCAGCGGTGGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1560139‑1559988 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtaGAACATGGTGATGTCGGCGATGTGCACGATCAGCATCCCTCCGGGATCGTCTTCGGGTCTGTCATCCGGCGTTGAATTGCCGGCGATGAAATGCCTAAAGGTGGACCTATCAGAAGGATAGTTTGTTCGATCGGTTTGAGAGGAGGG > NC_002947/1560012‑1560158 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |