New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1604658 | 74 (1.260) | 5 (0.090) | 4/248 | NT | 6.5% | coding (1593/1707 nt) | PP_1407 | sulfate transporter |
? | NC_002947 | = 1604702 | 73 (1.310) | coding (1549/1707 nt) | PP_1407 | sulfate transporter |
CCTGTGCTGGCCCTTTCGCGGGTGAACAGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1604504‑1604658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatcGCCCGCGCCCGTGGCACTTTCCTGCGCATGCTGGTGCGCTCGGGGATGGCGCGGG < NC_002947/1604702‑1604648 CCTGTGCTGGCCCTTTCGCGGGTGAACAGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGC > 3:26646/1‑149 CTGTGCTGGCCCTTTCGCGGGTGAACAGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCG > 2:126205/1‑149 TGCTGGCCCTTTCGCGGGTGAACAGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCA > 3:67708/1‑149 TGCTGGCCCTTTCGCGGGTGAACAGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGC < 7:48940/147‑1 AGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATCGCCCGCGCCCGTGGCACTTTC > 1:160827/1‑149 GCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGGACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATCGCCCGCGCCCGTGGCACTTTCCTGCGCATGCTGGTGCGCTCGGGGATGGCGCG < 5:282094/148‑1 CACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATCGCCCGCGCCCGTGGCACTTTCCTGCGCATGCTGGTGCGCTCGGGGATGGCGCGGG < 2:160827/149‑1 GCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATCGCCCGCGCCCGTGGCACTTTCCTGCGCATGCTGGTGCGCTCGGGGATGGCGCG > 5:355068/1‑113 GCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATCGCCCGCGCCCGTGGCACTTTCCTGCGCATGCTGGTGCGCTCGGGGATGGCGCG < 6:355068/113‑1 CCTGTGCTGGCCCTTTCGCGGGTGAACAGGATGAAAGCCGCTAACCCTGTTCGGTCACTTGCACACTGCGGTTTCGGTTGCGCCACACGCGGTACGCACGAATCCCCGCGCGTACCGAGCCGAATAGCAGTTTTTCTTCCATGTCCCGCGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1604504‑1604658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatcGCCCGCGCCCGTGGCACTTTCCTGCGCATGCTGGTGCGCTCGGGGATGGCGCGGG < NC_002947/1604702‑1604648 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |