| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1640764 = | 63 (1.070) | 4 (0.070) | 4/248 | NT | 7.1% | coding (187/957 nt) | cmoB | tRNA 5‑methoxyuridine(34) synthase CmoB |
| ? | NC_002947 | 1640799 = | 45 (0.810) | coding (152/957 nt) | cmoB | tRNA 5‑methoxyuridine(34) synthase CmoB | |||||
GGGCACGCCCCTGGCTTCCTGGTCGCAAGGCCTGCAAGCACAACTGGACGCCAAGCTGGAAAAGGGTCACGGTGACCTCGACCGCTGGCGCGGGGCGCTGGAAGCCCTGCCCGCCCTGCAACCCAGTGAAATCGACCTGGTCAACGGGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1640915‑1640764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggttgcAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGACAGATCGA > NC_002947/1640799‑1640946 GGGCACGCCCCTGGCTTCCTGGTCGCAAGGCCTGCAAGCACAACTGGACGCCAAGCTGGAAAAGGGTCACGGTGACCTCGACCGCTGGCGCGGGGCGCTGGAAGCCCTGCCCGCCCTGCAACCCAGTGAAATCGACCTGGTCAACGGGT < 7:136340/149‑1 CCCTGCAACCCAGTGAAATCGACCTGGTCAACGGGTTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGG > 5:152825/1‑149 CCTGCAACCCAGTGAAATCGACCTGGTCAACGGGTTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGC < 6:152825/149‑1 CCTGCAACCCAGTGAAATCGACCTGGTCAACGGGTTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGC > 6:292188/1‑149 CTGGTCAACGGGTTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGA < 5:292188/149‑1 GGTTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGAC < 5:51413/147‑1 GGTTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGA > 5:35620/1‑146 TTGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGACAGAT > 2:186828/1‑149 TGCAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGA > 7:213734/1‑143 CAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGACAGATCGA < 1:47211/149‑1 CAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGACAGATCGA > 6:35042/1‑149 GGGCACGCCCCTGGCTTCCTGGTCGCAAGGCCTGCAAGCACAACTGGACGCCAAGCTGGAAAAGGGTCACGGTGACCTCGACCGCTGGCGCGGGGCGCTGGAAGCCCTGCCCGCCCTGCAACCCAGTGAAATCGACCTGGTCAACGGGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1640915‑1640764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggttgcAGGGCGGGCAGGGCTTCCAGCGCCCCGCGCCAGCGGTCGAGGTCACCGTGACCCTTTTCCAGCTTGGCGTCCAGTTGTGCTTGCAGGCCTTGCGACCAGGAAGCCAGGGGCGTGCCCGCCAGGCGGCGGACGAGGGGAGACAGATCGA > NC_002947/1640799‑1640946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |