| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1655524 = | 58 (0.980) | 4 (0.070) | 4/252 | NT | 6.6% | coding (1245/4527 nt) | PP_1449 | hypothetical protein |
| ? | NC_002947 | 1655560 = | 57 (1.010) | coding (1209/4527 nt) | PP_1449 | hypothetical protein | |||||
ACAACCGCAAGACCACCACCACCCACAAGCAACAACAGGGCAGTCAATTGCTGGGCACTGAGAGCGTGCTGTTGCAGTCCGGCGACGACATGCGCATGACCGCCGCGAAGGTGGACGCCGGTAACGAGCTGACGGTCGACAGCGGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1655675‑1655524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcGTCCACCTTCGCGGCGGTCATGCGCATGTCGTCGCCGGACTGCAACAGCACGCTCTCAGTGCCCAGCAATTGACTGCCCTGTTGTTGCTTGTGGGTGGTGGTGGTCTTGCGGTT > NC_002947/1655560‑1655673 ACAACCGCAAGACCACCACCACCCACAAGCAACAACAGGGCAGTCAATTGCTGGGCACTGAGAGCGTGCTGTTGCAGTCCGGCGACGACATGCGCATGACCGCCGCGAAGGTGGACGCCGGTAACGAGCTGACGGTCGACAGCGGTGCC > 3:331939/1‑149 AACCGCAAGACCACCACCACCCACAAGCAACAACAGGGCAGTCAATTGCTGGGCACTGAGAGCGTGCTGTTGCAGTCCGGCGACGACATGCGCATGACCGCCGCGAAGGTGGACGCCGGTAACGAGCTGACGGTCGACAGCGGTGCCGG < 2:149884/149‑1 CGCCGGTAACGAGCTGACGGTCGACAGCGGTGCCGGCGTCCACCTTCGCGGCGGTCATGCGCATGTCGTCGCCGGACTGCAACAGCACGCTCTCAGTGCCCAGCAATTGACTGCCCTGTTGTTGCTTGTGGGTGGTGGTGGTCTTGCGG > 4:213455/1‑149 GCCGGTAACGAGCTGACGGTCGACAGCGGTGCCGGCGTCCACCTTCGCGGCGGTCATGCGCATGTCGTCGCCGGACTGCAACAGCACGCTCTCAGTGCCCAGCAATTGACTGCCCTGTTGTTGCTTGTGGGTGGTGGTGGT > 1:195560/1‑141 GCCGGTAACGAGCTGACGGTCGACAGCGGTGCCGGCGTCCACCTTCGCGGCGGTCATGCGCATGTCGTCGCCGGACTGCAACAGCACGCTCTCAGTGCCCAGCAATTGACTGCCCTGTTGTTGCTTGTGGGTGGTGGTGGT < 2:195560/141‑1 CCGGTAACGAGCTGACGGTCGACAGCGGTGCCGGCGTCCACCTTCGCGGCGGTCATGCGCATGTCGTCGCCGGACTGCAACAGCACGCTCTCAGTGCCCAGCAATTGACTGCCCTGTTGTTGCTTGTGGGTGGTGGTGGTCTTGCGGTT < 3:213455/149‑1 ACAACCGCAAGACCACCACCACCCACAAGCAACAACAGGGCAGTCAATTGCTGGGCACTGAGAGCGTGCTGTTGCAGTCCGGCGACGACATGCGCATGACCGCCGCGAAGGTGGACGCCGGTAACGAGCTGACGGTCGACAGCGGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1655675‑1655524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcGTCCACCTTCGCGGCGGTCATGCGCATGTCGTCGCCGGACTGCAACAGCACGCTCTCAGTGCCCAGCAATTGACTGCCCTGTTGTTGCTTGTGGGTGGTGGTGGTCTTGCGGTT > NC_002947/1655560‑1655673 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |