| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1722037 = | 74 (1.260) | 5 (0.090) | 5/250 | NT | 6.8% | coding (670/3066 nt) | PP_1517 | RND family transporter |
| ? | NC_002947 | 1722076 = | 67 (1.190) | coding (709/3066 nt) | PP_1517 | RND family transporter | |||||
GCGGTGCAGGTGGGTCGTTGAAGCCACGGTGCACCTCGGCGACATCACCAATCCGGAAGGTGCGATCACCCACGCGAATGGGGAACTGGCGGATCTGCTCGACACTGTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1722187‑1722037‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgtTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGCACCGCGCATGCGCTTCATGGGCGAGGATGCCATTGGCC > NC_002947/1722076‑1722220 GCGGTGCAGGTGGGTCGTTGAAGCCACGGTGCACCTCGGCGACATCACCAATCCGGAAGGTGCGATCACCCACGCGAATGGGGAACTGGCGGATCTGCTCGACACTGTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGC < 6:262565/149‑1 GGTGCAGGTGGGTCGTTGAAGCCACGGTGCACCTCGGCGACATCACCAATCCGGAAGGTGCGATCACCCACGCGAATGGGGAACTGGCGGATCTGCTCGACACTGTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGT > 8:70033/1‑149 TGTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCAC > 3:207568/1‑149 GAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGCCCCACCTG > 6:328152/1‑148 AAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGC < 7:93602/148‑1 AAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGC > 8:93602/1‑148 CTCACGCGCAGTTGCAAGCGCTCGCTGGGCGTCTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGCACCGCGCATG < 4:207568/149‑1 GCGTTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGCACCGCGCATGCGCTTCATGGGCGAGGATGCCATTGGCC < 5:321578/149‑1 GCGTTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGCACCGCGCATGCGCTTCATGGGCGAGGATGCCATTGGCC < 7:21758/149‑1 GCGGTGCAGGTGGGTCGTTGAAGCCACGGTGCACCTCGGCGACATCACCAATCCGGAAGGTGCGATCACCCACGCGAATGGGGAACTGGCGGATCTGCTCGACACTGTCGAAACGCCCGCTCACGCGCAGTTGCAAGCGCTCGCTGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1722187‑1722037‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgtTTCGACAGTGTCGAGCAGATCCGCCAGTTCCCCATTCGCGTGGGTGATCGCACCTTCCGGATTGGTGATGTCGCCGAGGTGCACCGTGGCTTCAACGACCCACCTGCACCGCGCATGCGCTTCATGGGCGAGGATGCCATTGGCC > NC_002947/1722076‑1722220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |