New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1967145 =	54 (0.920)	5 (0.110)	7/196	NT	15.3%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967241 =	15 (0.340)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase

AGATCATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1967325‑1967145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCGCCG  >  NC_002947/1967241‑1967385                                                                                                                                                                                                                                                                                                                                        AGATCATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATC                                                                                                                                                                                   <  4:324833/149‑1  GATCATGCCGGTGTACCTGTACCTGATGGGGCAGGTCATCACAGGGGTGAACGGGCAGGCGTTCAACGCCGAATAAACCTGCATCGGCCTCTTCGCGTGCTTGCCCGCTCCCACAGGGAGGGCGCAATCCTTGAGGGTTGCGGTGATC                                                                                                                                                                                   <  5:40273/148‑1      ATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCCCAGGCAGGGCGCCATCCGTGAGGGATGGGGTGATCCGGTG                                                                                                                                                                              >  6:73958/1‑149       TGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGG                                                                                                                                                                             <  2:42734/149‑1             TGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCGCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGG                                                                                                                                                                       <  3:343633/149‑1               TACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGTACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGAAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGG                                                                                                                                                                      <  8:250471/148‑1                 CCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAA                                                                                                                                                                   <  3:40655/149‑1                  CTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATACGTGAGGGTTGCGGTGTTGCTGTGGGAGCGGGacag                                                                                                                                                                  >  8:160159/1‑145                       CCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGC                                                                                                                                                             >  5:278661/1‑149                       CCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGC                                                                                                                                                             <  2:94517/149‑1                                                                                                            GCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACC                                                                        >  5:166886/1‑149                                                                                                                CCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCA                                                                    >  8:32421/1‑149                                                                                                                 CACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGTCAT                                                                   >  5:285703/1‑149                                                                                                                    AGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGAT                                                                <  1:94517/149‑1                                                                                                                           GCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCG                                                         <  6:166886/149‑1                                                                                                                                                           GGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGG                          <  4:169686/148‑1                                                                                                                                                            GAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGG                        >  4:184549/1‑149                                                                                                                                                               CGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTA                      <  4:40655/148‑1                                                                                                                                                                GGGCACGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGG                    >  5:257687/1‑149                                                                                                                                                                  GCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCC                  >  7:134463/1‑149                                                                                                                                                                      GCCCGCGAAGAGGCCGGTGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGG              <  6:285703/149‑1                                                                                                                                                                       CCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGC             >  1:297/1‑149                                                                                                                                                                        CCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCC            >  5:112607/1‑149                                                                                                                                                                         CGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCC           <  4:343633/149‑1                                                                                                                                                                         CGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCC           >  6:253036/1‑149                                                                                                                                                                           CGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCG          >  8:189304/1‑148                                                                                                                                                                           CGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTCCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGC         <  7:250471/149‑1                                                                                                                                                                              AGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACACGTACACCGGCATGATCTCTTAGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATC      >  5:99166/1‑149                                                                                                                                                                                  GCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCGCCG  >  2:139433/1‑149                                                                                                                                                                                                                                                                                                                                        AGATCATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1967325‑1967145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCGCCG  >  NC_002947/1967241‑1967385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.