| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2066865 = | 75 (1.270) | 5 (0.090) | 5/248 | NT | 6.7% | coding (409/972 nt) | PP_1843 | Mg(2+)/Co(2+) transporter |
| ? | NC_002947 | 2066918 = | 68 (1.220) | coding (356/972 nt) | PP_1843 | Mg(2+)/Co(2+) transporter | |||||
CCAGTGCGCCACGAAGGCAAGCTGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2067015‑2066865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggcgTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGCGAATAGGTGACGATGAACAACGCGTCACCGAAGGTTTCCAGC > NC_002947/2066918‑2067058 CCAGTGCGCCACGAAGGCAAGCTGGAATTCATCGCAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGG < 4:58618/149‑1CCAGTGAGCCACGAAGGCAAGCTGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGG < 4:34432/149‑1 CCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATG < 7:37741/110‑1 TCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGC > 6:31480/1‑149 CCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAAT > 1:302489/1‑123 CCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAAT < 2:302489/123‑1 CATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGC < 3:204571/149‑1 CATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGC > 4:204571/1‑149 CATGGCGTAGGATTTGGAGTGGCCGTTGCGGCAGGGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGCGAATAGGTGACGATGAACAACGCGTCACCGAAGGTTTCCAGC > 1:55937/1‑149 GTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCA < 3:238539/77‑1 GTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCA > 4:238539/1‑77 CCAGTGCGCCACGAAGGCAAGCTGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2067015‑2066865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggcgTAGGATTTGGAGTGGCCGTTGCGGCA‑GGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGCGAATAGGTGACGATGAACAACGCGTCACCGAAGGTTTCCAGC > NC_002947/2066918‑2067058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |