| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2080780 = | 58 (0.980) | 3 (0.050) | 3/248 | NT | 5.6% | coding (268/570 nt) | efp | elongation factor P |
| ? | NC_002947 | 2080827 = | 46 (0.830) | coding (315/570 nt) | efp | elongation factor P | |||||
TTCTCGGTGTAGACAACTTTACGGCTGATGGTGGTCGGCAGCTCAACCGACACCAGACGGCCTTCGAAGAACACGGCTTCGCAGACGTCTTCCATGCCTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2080931‑2080780‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtacatCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTCTACACCGAGAACGCTGCTCGCGGTGACACCTCCGGCAAAGTCATGAAGCCTGC > NC_002947/2080827‑2080973 TTCTCGGTGTAGACAACTTTACGGCTGATGGTGGTCGGCAGCTCAACCGACACCAGACGGCCTTCGAAGAACACGGCTTCGCAGACGTCTTCCATGCCTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTA > 7:242381/1‑149 CTCGGTGTAGACAACTTTACGGCTGATGGTGGTCGGCAGCTCAACCGACACCAGACGGCCTTCGAAGAACTCGGCTTCGCAGACGTCTTCCATGCCTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTAC < 7:212857/148‑1 CTCGGTGTAGACAACTTTACGGCTGATGGTGGTCGGCAGCTCAACCGACACCAGACGGCCTTCGAAGAACACGGCTTCGCAGACGTCTTCCATGCCTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTAC < 5:84469/148‑1 CTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTACATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAA < 1:283317/143‑1 CTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTACATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAA > 2:283317/1‑143 ACGGCAGAACGGCTTCGATGTCCTCGGCGTTAAGCTCGTACATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTATGGTGTCGGTTGAGCTGCCGACACCCATAAGCCGTAAAGTTGTCTACACCGAGAcc > 8:310124/1‑147 CATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTCTACACCGAGAACGCTGCTCGCGGTGACACCTCCGGCAAAGTCATGAAGCCTG < 8:257896/149‑1 ATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTCTACACCGAGAACGCTGCTCGCGGTGACACCTCCGGCAAAGTCATGAAGCCTGC > 3:37234/1‑149 ATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTCTACACCGAGAACGCTGCTCGCGGTGACACCTCCGGCAAAGTCATGAAGCCTGC > 6:195290/1‑149 ATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTCTACACCGAGAACGCTGCTCGCGGTGACACCTCCGGCAAAGTCATGAAGCCTGC > 8:229149/1‑149 ATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTC > 1:134989/1‑96 ATCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTC < 2:134989/96‑1 TTCTCGGTGTAGACAACTTTACGGCTGATGGTGGTCGGCAGCTCAACCGACACCAGACGGCCTTCGAAGAACACGGCTTCGCAGACGTCTTCCATGCCTTCTTCGATGTACGGCAGAACGGCTTCGATGTCCTCGGCGTTCAGCTCGTACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2080931‑2080780‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtacatCGAAGAAGGCATGGAAGACGTCTGCGAAGCCGTGTTCTTCGAAGGCCGTCTGGTGTCGGTTGAGCTGCCGACCACCATCAGCCGTAAAGTTGTCTACACCGAGAACGCTGCTCGCGGTGACACCTCCGGCAAAGTCATGAAGCCTGC > NC_002947/2080827‑2080973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |