| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2232043 = | 69 (1.170) | 6 (0.110) | 4/248 | NT | 8.6% | coding (180/606 nt) | PP_1970 | lipoprotein |
| ? | NC_002947 | 2232089 = | 62 (1.110) | coding (226/606 nt) | PP_1970 | lipoprotein | |||||
ACCTACCGAGCGCGCCTGGGCGATGGCCTCTTCGAGGCCCAGCGGGCCCTGGGCACGACGTACCATCGGGAAGTATTCGACGAAGCTCTTGAAGGCCTGCTGGGCCACTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2232196‑2232043‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatgcaGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGCGCTCGGTAGGTGCGGACTACGTGTTGTACACGCGCTTCGCACGTACCGA > NC_002947/2232089‑2232234 ACCTACCGAGCGCGCCTGGGCGATGGCCTCTTCGAGGCCCAGCGGGCCCTGGGCACGACGTACCATCGGGAAGTATTCGACGAAGCTCTTGAAGGCCTGCTGGGCCACTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACG > 6:160131/1‑148 ACTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCTAGGCGCGCTC > 3:221760/1‑149 ACTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGCGCTC > 3:32616/1‑149 CTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGC < 7:180182/144‑1 CTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGC > 8:180182/1‑144 CTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCC > 5:155151/1‑131 CTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCC < 6:155151/131‑1 GAATGCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGCGTTCGGTAGGTGCGGACTACGTGTTGTACACGCGCTTCGCACGTA < 7:129417/149‑1 GCAGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGCGCTCGGTAGGTGCGGACTACGTGTTGTACACGCGCTTCGCACGTACCGA > 8:182570/1‑149 ACCTACCGAGCGCGCCTGGGCGATGGCCTCTTCGAGGCCCAGCGGGCCCTGGGCACGACGTACCATCGGGAAGTATTCGACGAAGCTCTTGAAGGCCTGCTGGGCCACTGCATTCTGCCGAGGCACCGGCCCCTCGCCCGGCGGCACGAATGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2232196‑2232043‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatgcaGTGGCCCAGCAGGCCTTCAAGAGCTTCGTCGAATACTTCCCGATGGTACGTCGTGCCCAGGGCCCGCTGGGCCTCGAAGAGGCCATCGCCCAGGCGCGCTCGGTAGGTGCGGACTACGTGTTGTACACGCGCTTCGCACGTACCGA > NC_002947/2232089‑2232234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |