New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2327072 = | 51 (0.870) | 3 (0.050) | 3/248 | NT | 5.9% | coding (232/1962 nt) | PP_2045 | metallo‑beta‑lactamase family protein |
? | NC_002947 | 2327118 = | 47 (0.840) | coding (186/1962 nt) | PP_2045 | metallo‑beta‑lactamase family protein |
CCACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2327224‑2327072 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcccGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGGC > NC_002947/2327118‑2327264 CCACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTG < 1:57929/149‑1 CACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGG < 6:197371/149‑1 CCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCC > 3:8858/1‑149 CCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCC > 7:35516/1‑149 CCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGG < 7:309867/138‑1 CCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGG > 8:309867/1‑138 AACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTG > 7:317535/1‑137 AACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTG < 8:317535/137‑1 GTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGAGGCCGCGGTGGCA > 2:180140/1‑149 TGGCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGG > 2:366991/1‑149 GCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGG < 2:340130/149‑1 GCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGG < 2:57929/149‑1 GCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGG < 1:180140/149‑1 GCCCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGG > 6:131553/1‑149 CCGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGGC > 3:85418/1‑149 CGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGGC > 4:345438/1‑148 CGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGGC > 2:108369/1‑148 CCACCGCGGCCACCCTGGCCAGCAACCAGCAGTGGCTGCAACGGTTGCCTTTCGAGGATCGCGTCGATTACGAAACAGCCCGGCGTGGGCTGGTCGAGCGGTTCAACGGGCCAGTCGCCACGGCCGATGGCAAGACGGTGTGGAACCTGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2327224‑2327072 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcccGTTGAACCGCTCGACCAGCCCACGCCGGGCTGTTTCGTAATCGACGCGATCCTCGAAAGGCAACCGTTGCAGCCACTGCTGGTTGCTGGCCAGGGTGGCCGCGGTGGCATCCTTGGCCGCTGTTGCGCCCAGGCTCGGAAGGGGGGC > NC_002947/2327118‑2327264 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |