| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2357050 = | 53 (0.900) | 4 (0.070) | 4/242 | NT | 7.7% | coding (328/387 nt) | PP_2071 | hypothetical protein |
| ? | NC_002947 | 2357122 = | 47 (0.860) | coding (256/387 nt) | PP_2071 | hypothetical protein | |||||
CATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2357202‑2357050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcggggcaCCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGG > NC_002947/2357122‑2357267 CATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGG < 4:61779/149‑1 ACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGC < 1:227217/132‑1 ACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGC > 2:227217/1‑132 ATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAG > 5:79737/1‑148 CCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCA < 5:16328/137‑1 CCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCA > 6:16328/1‑137 AGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGA < 6:79737/149‑1 GGGGCACCACATAGAGTTCCCCGGGGTTCACATTCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCTCCTTCGATGCGCACGACCTTGAAC < 6:223355/149‑1 GCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGG < 1:237512/149‑1 GCACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGG < 8:244692/149‑1 CACCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCCTGAACTGG > 3:130105/1‑148 CATTCCTGGTGCTGGAAGGCACCCTGCGTATCGACCTGCCGGATGGCTGCGTGCATGTGAACCCCGGGGAACTCTATGTGGTGCCCCGCGGCGTCGAGCACCGGACCGCTGCGCAAGGCGAAGCGAAACTGATGATGATCGAACCGCGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2357202‑2357050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcggggcaCCACATAGAGTTCCCCGGGGTTCACATGCACGCAGCCATCCGGCAGGTCGATACGCAGGGTGCCTTCCAGCACCAGGAATGCTTCGTCGGTCTCCGGGTGCGCGTGCCAGATGAATTCGCCTTCGATGCGCACGACCTTGAACTGG > NC_002947/2357122‑2357267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |