New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2468066 =	53 (0.900)	5 (0.090)	5/250	NT	9.3%	coding (171/264 nt)	PP_2161	hypothetical protein
	?	NC_002947	2468097 =	47 (0.840)					coding (140/264 nt)	PP_2161	hypothetical protein

CAAGAGCGCCTGAACAGCTTGCGCGAGCAACTGGACCGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAG‑A‑TCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2468218‑2468066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtgGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATT  >  NC_002947/2468097‑2468223                                                                                                                                                                                                                                                                                            CAAGAGCGCCTGAACAGCTTGCGCGAGCAACTGGACCGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAG‑A‑TCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGG                                                                                                                                     >  1:87959/1‑149   AGAGCGCCTGAACAGCTTGCGCGAGCAACTGGACCTCAACTTACCGCTTTCGGTAGAAGAGCTTGCCGCCCTGCACGAAGAGTCGCGCCAGCATTCGAGGCGCAACTGAAACTTGAGTAAGCCACGCCAGACAACAACCTGGTTGACG                                                                                                                                      <  1:101797/148‑1      GCGCCTGAACAGCTTGCGCGAGCAACTGGACCGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAG‑A‑TCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTG                                                                                                                                 >  3:159472/1‑148                                                           tAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAG‑A‑TCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACATCCTGGTGGACGGCGTG                                                                                                                                 <  4:41397/94‑1                                                                                                                    TGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGT                                                   <  1:51101/118‑1                                                                                                                    TGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGT                                                   >  2:51101/1‑118                                                                                                                        GAAGCCACGCCAGACAACAACCTGGTGGACGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAG                >  6:368221/1‑149                                                                                                                             CACGCCAGACAACAACCTGGTGGACGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCAAGTTGCTCGCGCAAGCTGTTCAGGCGCT           >  1:369898/1‑149                                                                                                                                      CAACAACCTGGTGGACGGCGTGGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATT  <  5:368221/149‑1                                                                                                                                                                                                                                                                                            CAAGAGCGCCTGAACAGCTTGCGCGAGCAACTGGACCGCAACGTACCGCTTTCGGAAGAAGAGCTGGCCGCCCTGCACGAAGAGGCGCGCCAG‑A‑TCGAGGCGCAACTGAAACTTGAGGAAGCCACGCCAGACAACAACCTGGTGGACGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2468218‑2468066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtgGCTTCCTCAAGTTTCAGTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATT  >  NC_002947/2468097‑2468223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.