New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 248667265 (1.100)5 (0.090) 4/250 NT 7.5% coding (1264/1359 nt) spuC‑I polyamine:pyruvate transaminase
?NC_002947 = 2486687 62 (1.100)coding (1279/1359 nt) spuC‑I polyamine:pyruvate transaminase

AGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2486521‑2486672
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcaCCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCA  <  NC_002947/2486687‑2486545
                                                                                                                                                                                                                                                                                                       
AGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATG                                                                                                                                                     <  2:105258/148‑1
                          CGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATG                                                                                                                          <  5:109753/149‑1
                                              AAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA                                                                                                                                                 <  1:58714/106‑1
                                              AAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA                                                                                                                                                 >  2:58714/1‑106
                                                            CCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATGGT                                                                                                                        >  3:107274/1‑117
                                                            CCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATGGT                                                                                                                        <  4:107274/117‑1
                                                                                  GGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATG                                                                                                                          >  7:173919/1‑93
                                                                                  GGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATG                                                                                                                          <  8:173919/93‑1
                                                                                                                                                  TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCg  >  3:48306/1‑148
                                                                                                                                                  TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCg  >  3:53161/1‑148
                                                                                                                                                  TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGA       <  5:255415/144‑1
                                                                                                                                                  TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGA       >  6:255415/1‑144
                                                                                                                                                  TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTG                             >  5:84654/1‑122
                                                                                                                                                  TGATCACCAGCGGTGGCGCGATGATCATGGTGGCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTG                             <  6:84654/122‑1
                                                                                                                                                                                                                                                                                                       
AGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2486521‑2486672
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcaCCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCA  <  NC_002947/2486687‑2486545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.