New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2486672 | 65 (1.100) | 5 (0.090) | 4/250 | NT | 7.5% | coding (1264/1359 nt) | spuC‑I | polyamine:pyruvate transaminase |
? | NC_002947 | = 2486687 | 62 (1.100) | coding (1279/1359 nt) | spuC‑I | polyamine:pyruvate transaminase |
AGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2486521‑2486672 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcaCCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCA < NC_002947/2486687‑2486545 AGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATG < 2:105258/148‑1 CGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATG < 5:109753/149‑1 AAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA < 1:58714/106‑1 AAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA > 2:58714/1‑106 CCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATGGT > 3:107274/1‑117 CCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATGGT < 4:107274/117‑1 GGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATG > 7:173919/1‑93 GGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCACCAGCGGTGGCGCGATGATCATG < 8:173919/93‑1 TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCg > 3:48306/1‑148 TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCg > 3:53161/1‑148 TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGA < 5:255415/144‑1 TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGA > 6:255415/1‑144 TGATCACCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTG > 5:84654/1‑122 TGATCACCAGCGGTGGCGCGATGATCATGGTGGCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTG < 6:84654/122‑1 AGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTGTCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2486521‑2486672 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcaCCAGCGGTGGCGCGATGATCATGGTGTCGCCTACAGCGCGCATGATCAGGCCGTTGTCGAAGCAGTGCTGGCGACAGATCATGCCGACACCTTTGCCTTCATGACGGGCACGGGTGGCCTTGTCTTTCACCAACTCGATCGCA < NC_002947/2486687‑2486545 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |