New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2565638 =	60 (1.020)	3 (0.050)	3/254	NT	5.4%	coding (1314/1932 nt)	pctB	methyl‑accepting chemotaxis protein PctB
	?	NC_002947	2565671 =	46 (0.810)					coding (1281/1932 nt)	pctB	methyl‑accepting chemotaxis protein PctB

CGTCGATCATCGGGTCTGAAGAACAGAGCATGCGCACCAACAGCGTCGCTGCGGCCATCAACGAACTGGGCGCCGCCACCCAGGAAATCGCCCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2565789‑2565638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCGA  >  NC_002947/2565671‑2565817                                                                                                                                                                                                                                                                                                             CGTCGATCATCGGGTCTGAAGAACAGAGCATGCGCACCAACAGCGTCGCTGCGGCCATCAACGAACTGGGCGCCGCCACCCAGGAAATCGCCCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGT                                                                                                                                                        <  7:223083/149‑1                                    ACCAACAGCGTCGCTGCGGCCATCAACGAACTGGGCGCCGCCACCCAGGAAATCGCCCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGT                                                                                                                                                        <  3:306793/114‑1                                    ACCAACAGCGTCGCTGCGGCCATCAACGAACTGGGCGCCGCCACCCAGGAAATCGCCCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGT                                                                                                                                                        >  4:306793/1‑114                                                                                                              TTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCT                                                      >  1:347761/1‑138                                                                                                              TTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCT                                                      <  2:347761/138‑1                                                                                                                   AACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGAT                                      >  3:97528/1‑149                                                                                                                                                       GCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCG   <  4:346761/148‑1                                                                                                                                                       GCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCC    <  7:270460/147‑1                                                                                                                                                        CATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCGA  >  7:190023/1‑148                                                                                                                                                                                                                                                                                                             CGTCGATCATCGGGTCTGAAGAACAGAGCATGCGCACCAACAGCGTCGCTGCGGCCATCAACGAACTGGGCGCCGCCACCCAGGAAATCGCCCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2565789‑2565638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCGA  >  NC_002947/2565671‑2565817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.