New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 259069354 (0.920)5 (0.090) 4/252 NT 8.0% coding (37/426 nt) PP_2268 endodeoxyribonuclease I
?NC_002947 = 2590730 63 (1.110)coding (74/426 nt) PP_2268 endodeoxyribonuclease I

ATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2590544‑2590693
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCATATTTGAGTCCCACTTTTTCGGCATCCAGAGGCGTCTTAGAAGTCTTCTTCGTAAGTGTTGCTTTCGCCACCTTCTTCCTCTTCTTC  <  NC_002947/2590730‑2590584
                                                                                                                                                                                                                                                                                                         
ATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAA                                                                                                                                                      <  6:358269/149‑1
                                             AGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAA                                                                                                          <  3:268419/148‑1
                                                                     CACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTT                                                                                                             >  1:222865/1‑121
                                                                     CACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTT                                                                                                             <  2:222865/121‑1
                                                                             AAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAA                                                                                                          >  3:99881/1‑116
                                                                             AAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAA                                                                                                          <  4:99881/116‑1
                                                                                                                                                    AGCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCATATTTGAGTCCCACTTTTTCGGCATCCAGAGGCGTCTTAGAAGTCTTCTTCGTAAGTGTTGCTTTCGCCACCTTCTTCCTCTTCTTC  <  2:347974/149‑1
                                                                                                                                                                                                                                                                                                         
ATCCGTAGCCGAACAAGAACAAGAAGAAAAAGACGAGTTCGAAGAAGAGGAAGAAGGTGGCGAAAGCAACACTTACGAAGAAGACTTCTAAGACGCCTCTGGATGCCGAAAAAGTGGGACTCAAATATGGGTTCCGCTCCGGGCTTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2590544‑2590693
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagCCCATGCCGACAGCCGTTAGTTGGTCTGCGGCACGTTCTTCAAGCCCGGAGCGGAACCCATATTTGAGTCCCACTTTTTCGGCATCCAGAGGCGTCTTAGAAGTCTTCTTCGTAAGTGTTGCTTTCGCCACCTTCTTCCTCTTCTTC  <  NC_002947/2590730‑2590584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.