New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2662511 =	59 (1.000)	4 (0.070)	4/246	NT	6.6%	coding (615/891 nt)	mmgF	2‑methylisocitrate lyase
	?	NC_002947	2662548 =	57 (1.030)					coding (652/891 nt)	mmgF	2‑methylisocitrate lyase

CGGCGCAGCGCGGTATACACGTTCTCGGCTGCTTTGTTCATGGCGCGGAACGCCGACAGCGGGTACAGCACCAACGACACGTCGACCGAGGCCAGCTCTTCGGTTGTGTACAGCGGCGTGGCACCGAACTCGGTGATGTTGGCCAGGATCGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2662666‑2662511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggtgccACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACCGCGCTGCGCCGTGACGGCACGCAAAAGAATGTGA  >  NC_002947/2662548‑2662689                                                                                                                                                                                                                                                                                                             CGGCGCAGCGCGGTATACACGTTCTCGGCTGCTTTGTTCATGGCGCGGAACGCCGACAGCGGGTACAGCACCAACGACACGTCGACCGAGGCCAGCTCTTCGGTTGTGTACAGCGGCGTGGCACCGAACTCGGTGATGTTGGCCAGGAT                                                                                                                                                        >  6:306930/1‑149     GCAGCGCTGTATACACGTTCTCGGCTGCTTTGTTCATGGCGCGGAACGCCGACAGCGGGTACAGCACCAACGACACGTCGACCGAGGCCAGCTCTTCGGTTGTGTACAGCGGCGTGGCACCGAACTCGGTGATGTTGGCCAGGATCGGT                                                                                                                                                    <  8:286432/149‑1     GCAGCGCGGTATACACGTTCTCGGCTGCTTTGTTCATGGCGCGGAACGCCGACAGCGGGTACAGCACCAACGACACGTCGACCGAGGCCAGCTCTTCGGTTGTGTACAGCGGCGTGGCACCGAACTCGGTGATGTTGGCCAGGATCGGT                                                                                                                                                    <  3:265904/149‑1                                                                                    GACCGAGGCCAGCTCTTCGGTTGTGTACAGCGGCGTGGCACCGAACTGGGTGATGTTGGCCAGGATCGGTGCCACGCCGGTGTACACAACCGAAGAGCTGGCGTCGGTCGCCGGGTCGGTGGTGGTGTACCCGCTGTCGGCGTTGCGCG                                                                     >  6:320498/1‑149                                                                                                                    GCGTGGCACCGAACTCGGTGATGTTGGCCAGGATCGGTGCCACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACC                                    >  7:217890/1‑149                                                                                                                         GCACCGAACTCGGTGATGTTGGCCAGGATCGGTGCCACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGT                                            <  5:207721/137‑1                                                                                                                         GCACCGAACTCGGTGATGTTGGCCAGGATCGGTGCCACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGT                                            >  6:207721/1‑137                                                                                                                                                  gcATCGGTGCCACGCCGCTGTACACAACCGAAGAGCTGGCCACGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACCGCGCTGCGCCGTGACGGCACGCAAAAGAAT      <  5:320498/147‑1                                                                                                                                                      CGGTGCCACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACCGCGCTGCGCCGTGACGGCACGCAAAAGAATGTGA  >  2:300427/1‑149                                                                                                                                                       GGTGCCACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACCGCGCTGCGCCGTGACGGCACGCAAAAGAATGTGA  <  1:300427/148‑1                                                                                                                                                            CACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTACTACCGCGCTGCGCCGTGACGGCACGCAAAAGAATGTG   <  1:66226/143‑1                                                                                                                                                            CACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACCGCGCTGCGCCGTGACGGCACGCAAAAGAATGTG   >  2:66226/1‑142                                                                                                                                                                                                                                                                                                             CGGCGCAGCGCGGTATACACGTTCTCGGCTGCTTTGTTCATGGCGCGGAACGCCGACAGCGGGTACAGCACCAACGACACGTCGACCGAGGCCAGCTCTTCGGTTGTGTACAGCGGCGTGGCACCGAACTCGGTGATGTTGGCCAGGATCGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2662666‑2662511 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggtgccACGCCGCTGTACACAACCGAAGAGCTGGCCTCGGTCGACGTGTCGTTGGTGCTGTACCCGCTGTCGGCGTTCCGCGCCATGAACAAAGCAGCCGAGAACGTGTA‑TACCGCGCTGCGCCGTGACGGCACGCAAAAGAATGTGA  >  NC_002947/2662548‑2662689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.