| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2723772 = | 56 (0.950) | 3 (0.060) | 3/242 | NT | 5.6% | coding (131/315 nt) | PP_2384 | membrane protein |
| ? | NC_002947 | 2723809 = | 49 (0.900) | coding (94/315 nt) | PP_2384 | membrane protein | |||||
CCAGAAATTCGCCGGAGCCCGCGCATGACCTGGATCCTGATTTTCGCCATGGGCGCCATCGTGTTTCTCAACCGCTACGCATTCCTGGAGCCGCGCCTGCCCTTGCGCCTGAGCTCGAATGCCCGGCAGTTTCTCGGCTTTGCCGTGCCGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2723926‑2723772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGC > NC_002947/2723809‑2723916 CCAGAAATTCGCCGGAGCCCGCGCATGACCTGGATCCTGATTTTCGCCATGGGCGCCATCGTGTTTCTCAACCGCTACGCATTCCTGGAGCCGCGCCTGCCCTTGCGCCTGAGCTCGAATGCCCGGCAGTTTCTCGGCTTTGCCGTGCC > 6:228501/1‑149 TCGAATGCCCGGCAGTTTCTCGGCTTTGCCGTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGC > 8:250386/1‑149 CCGGCAGTTTCTCGGCTTTGCCGTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGC > 7:259849/1‑106 CCGGCAGTTTCTCGGCTTTGCCGTGCCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGC < 8:259849/106‑1 CCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGG < 7:300490/108‑1 CCGGGCATTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGG > 8:300490/1‑108 CCAGAAATTCGCCGGAGCCCGCGCATGACCTGGATCCTGATTTTCGCCATGGGCGCCATCGTGTTTCTCAACCGCTACGCATTCCTGGAGCCGCGCCTGCCCTTGCGCCTGAGCTCGAATGCCCGGCAGTTTCTCGGCTTTGCCGTGCCGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2723926‑2723772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgggcatTCGAGCTCAGGCGCAAGGGCAGGCGCGGCTCCAGGAATGCGTAGCGGTTGAGAAACACGATGGCGCCCATGGCGAAAATCAGGATCCAGGTCATGCGCGGGCTCCGGC > NC_002947/2723809‑2723916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |