New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2936886 | 49 (0.830) | 3 (0.050) | 3/246 | NT | 5.8% | coding (920/1677 nt) | PP_2569 | MHS family metabolite MFS transporter |
? | NC_002947 | = 2936914 | 51 (0.920) | coding (948/1677 nt) | PP_2569 | MHS family metabolite MFS transporter |
GGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2936738‑2936886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttcttGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAGAATGGTGTGCCGATCAACAGTGAACCGGCAATCAGCAGGTTGGCGGTCTGCGCCTCGATCTTGAGCGTCTGCAACAGGAAGAACAACGCGTAGAACTGCCCG < NC_002947/2936914‑2936773 GGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTT < 1:62861/149‑1 GCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTAAAGCTCGCGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCTGCACACCATTCTTCATTTTCTGGCGG > 4:239309/1‑149 TTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAGAA > 7:20293/1‑149 TTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAG < 8:20293/147‑1 TCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGCTTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAGAA < 3:239309/148‑1 TCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAGAATGGTGTGCCGATCAACAGTGAACCGGCAATCAGCAGGTTGGCGGTCTGCGCCTCGATCTTGAGCGTCTGCAACAGGAAGAACAACGCGTAGAACTGCCCG < 5:213779/146‑1 TCTTGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAGAATGGTGTGCCGATCAACAGTGAACCGGCAATCAGCAGGTTGGCGGTCTGCGCCTCGATCTTGAGCGTCTGCAACAGGAAGAACAACGCGTAGAACTGCCCG > 6:213779/1‑146 GGCGGCACCGCCGGCCAGGCCGTGGTGTGGTACACCGGGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2936738‑2936886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttcttGCGGCCAATCCGGTCGGACAGGCTGCCGAAGAAAATGAAGAATGGTGTGCCGATCAACAGTGAACCGGCAATCAGCAGGTTGGCGGTCTGCGCCTCGATCTTGAGCGTCTGCAACAGGAAGAACAACGCGTAGAACTGCCCG < NC_002947/2936914‑2936773 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |