| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3146159 = | 60 (1.020) | 7 (0.120) | 3/254 | NT | 11.7% | coding (582/987 nt) | PP_2761 | ribose ABC transporter permease |
| ? | NC_002947 | 3146198 = | 47 (0.820) | coding (621/987 nt) | PP_2761 | ribose ABC transporter permease | |||||
CCAGTGGCTGGCTGCCAAGGACGATGATCTCCCGGCCTAAGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3146205‑3146159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAACGCCTACGCGCCGATGTCCGGCAATGCCTTCCT > NC_002947/3146198‑3146344 CCAGTGGCTGGCTGCCAAGGACGATGATCTCCCGGCCTAAGCG‑‑‑‑GCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGC > 6:76331/1‑148CCAGTGGCTGGCTGCCAAGGACGATGATCTCCCGGCCTAAGCG‑‑‑‑GCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGC > 6:81629/1‑148 GTGGCTGGCTGCCAAGGACGATGATCTCCCGGCCTAAGCG‑‑‑‑GCCACTGGTGGGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCAC > 1:92087/1‑149 CTGGCTGCCAAGGACGATGATCTCCCGGCCTAAGCGGCCAGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACG > 8:302564/1‑149 CTGCCAAGGACGATGATCTCCCGGCCTAAGCG‑‑‑‑GCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAACGC < 2:92087/149‑1 TGCCAAGGACGATGATCTCCCGGCCTAAGCGGCCAGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCT < 5:258606/131‑1 TGCCAAGGACGATGATCTCCCGGCCTAAGCGGCCAGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCT > 6:258606/1‑131 CAGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAACGCCTACGCGCCGATGTCCGGCAATGCCTTCCT > 3:83077/1‑149 CAGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAAC > 1:155306/1‑117 CAGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAAC < 2:155306/117‑1 AGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAACGCCTACGCGCCGATGTCCGGCAATGCCTTCCT > 1:282319/1‑148 AGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAACGCCTACGCGCCGATGTCCGGCAATGCCTTCCT > 4:99100/1‑148 CCAGTGGCTGGCTGCCAAGGACGATGATCTCCCGGCCTAAGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3146205‑3146159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaGCCACTGGT‑GGCGCGTTATTCGGGCCTGGCGCAGCGACGTATCGCTGCCCTGGTGTTCATCGCCAGTGCCTTTGCCAGCGCGCTGGCGGGCATTCTGCTGCCGGCCACGGTGAACGCCTACGCGCCGATGTCCGGCAATGCCTTCCT > NC_002947/3146198‑3146344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |