| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 3,261,156 | Δ3 bp | 5.8% | coding (101‑103/438 nt) | PP_2858 ← | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3261159 = | 52 (0.880) | 3 (0.060) | 3/242 | NT | 5.8% | coding (100/438 nt) | PP_2858 | hypothetical protein |
| ? | NC_002947 | = 3261155 | 50 (0.920) | coding (104/438 nt) | PP_2858 | hypothetical protein | |||||
CTCTATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3261312‑3261159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatcatcaAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCAGCAGTGG < NC_002947/3261155‑3261011 CTCTATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATC < 5:140112/147‑1 tcaATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCA < 1:70209/144‑1 tcaATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCA > 2:70209/4‑147 TCTATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCAT > 2:351703/1‑148 TCTATCGTT‑GCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATCA > 1:62388/1‑149 TATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATC < 5:22055/147‑1 tcgttGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATCAT < 2:62388/141‑1 ACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATC > 1:292930/1‑129 ACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATC < 2:292930/129‑1 ACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATCATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAAC > 7:26460/1‑149 TATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATCATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCT > 7:344113/1‑149 CTGACGGCTCAGGCGGACAAGGGGATCATCATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAG < 8:344113/149‑1 ATCATCATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCA < 2:295329/148‑1 TCATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCAGCAGT < 8:141121/149‑1 ATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCAGCAGTGG > 4:350990/1‑149 ATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCAGCAGTGG > 6:8090/1‑149 ATCAAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCAGCAGTG < 1:166894/148‑1 CTCTATCGTTCGCATCGCTGAACAGGGCCAGCGCTCAAAGAAGGAGTTGCCGTCGTGAGGAAACGTGACAAACGCCTCTATCACCTATTACTGGTGGGTTGTGTACTGGGGTCACTCAGCCTGACGGCTCAGGCGGACAAGGGGATCATCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3261312‑3261159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatcatcaAGCGCGATGTGCAGGTGCGCAACGCGACCATCCCGCCGCTGATTCCAGACCCGAGCCCTACCACCATCAATGCCAACCCTTCTGCCCACGTGCTCAAGCAAACCAACGAGCTGAGCGATGGCGATTTCGCCAGCATCAGCAGTGG < NC_002947/3261155‑3261011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |