New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3496375	62 (1.050)	5 (0.090)	3/246	NT	7.5%	coding (429/576 nt)	PP_3100	hypothetical protein
	?	NC_002947	= 3496415	65 (1.180)					coding (389/576 nt)	PP_3100	hypothetical protein

GCTCCTGCTCAGGCGCGATCGTCGCTGGACGGGTCTTTCACTTCGGCTTCACGGCCGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3496220‑3496375 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtcgAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCGGCCGTG  <  NC_002947/3496415‑3496269                                                                                                                                                                                                                                                                                                                 GCTCCTGCTCAGGCGCGATCGTCGCTGGACGGGTCTTTCACTTCGGCTTCACGGCCGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCG                                                                                                                                                            >  4:127463/1‑149       GCTCAGGCGCGATCGTCGCTGGACGGGTCTTTCACTTCGGCTTCACGGCCGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTC                                                                                                                                                      >  4:16532/1‑149                                                TTCACGGCCGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGC                                                                                                             >  5:104464/1‑149                                                        CGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGC                                                                                                     <  4:323128/149‑1                                                        CGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGC                                                                                                     <  6:89816/149‑1                                                        CGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGC                                                                                                     <  8:219394/149‑1                                                                   CCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGAT                                                                                           <  6:104464/148‑1                                                                                                                                                     GCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCG        >  2:235778/1‑149                                                                                                                                                     GCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCG        <  3:166465/149‑1                                                                                                                                                        GGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCGGCC     <  7:221575/149‑1                                                                                                                                                        GGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAA                            >  3:146525/1‑126                                                                                                                                                        GGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAA                            <  4:146525/126‑1                                                                                                                                                            GAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCGGCCGTG  >  3:16532/1‑148                                                                                                                                                                                                                                                                                                                 GCTCCTGCTCAGGCGCGATCGTCGCTGGACGGGTCTTTCACTTCGGCTTCACGGCCGAATTCCTTGCCCAAGGTCTTGAGCTTTTCGGTGTTCTGCAGCACGTCCATCAGCAGCTCTTCGAGCTTGTCGTTGCCGCCCATCTTGTTGCGCAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3496220‑3496375 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggtcgAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAGAACACCGAAAAGCTCAAGACCTTGGGCAAGGAATTCGGCCGTG  <  NC_002947/3496415‑3496269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.