| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3812495 = | 52 (0.880) | 6 (0.110) | 6/250 | NT | 11.0% | coding (819/1185 nt) | PP_3368 | MFS transporter |
| ? | NC_002947 | 3812545 = | 47 (0.840) | coding (869/1185 nt) | PP_3368 | MFS transporter | |||||
TAGCGGTGCCGCCAAGGCGATCATGGTGCCCACCAGGCCGATGCCCAGCAGCAGGCTCCACAGCGCCTGGGCGGCGAAGGTAAAGAACAGCAGCACGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3812642‑3812495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACAGATCCGCCTCATGGACATTGCCCATGA > NC_002947/3812545‑3812671 TAGCGGTGCCGCCAAGGCGATCATGGTGCCCACCAGGCCGATGCCCAGCAGCAGGCTCCACAGCGCCTGGGCGGCGAAGGTAAAGAACAGCAGCACGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCG > 3:12288/1‑148TAGCGGTGCCGCCAAGGCGATCATGGTGCCCACCAGGCCGATGCCCAGCAGCAGGCTCCACAGCGCCTGGGCGGCGAAGGTAAAGAACAGCAGCACGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCG > 3:358831/1‑144TAGCGGTGCCGCCAAGGCGATCATGGTGCCCACCAGGCCGATGCCCAGCAGCAGGCTCCACAGCGCCTGGGCGGCGAAGGTAAAGAACAGCAGCACGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCG < 4:358831/144‑1 CACGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCAGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACC > 2:186083/1‑149 CGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGC > 8:351718/1‑149 GGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGC > 2:300678/1‑148 GCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTA > 6:153056/1‑149 CACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACAGATCCGC < 5:153056/149‑1 GGCGCGGAACTGCAGGCGGTCGCCGTGCTGCTGTTCTTTACCTTCGCCGCCCACGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACAGATCCGCCTCATGGACATTGCCCATGA < 1:300678/149‑1 TAGCGGTGCCGCCAAGGCGATCATGGTGCCCACCAGGCCGATGCCCAGCAGCAGGCTCCACAGCGCCTGGGCGGCGAAGGTAAAGAACAGCAGCACGGCGACCGACCACATCAGTACCAAGCCCACGGCGCGGAACTGCAGGCGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3812642‑3812495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcgCCGTGCTGCTGTTCTTTACCTTCGCCGCCCAGGCGCTGTGGAGCCTGCTGCTGGGCATCGGCCTGGTGGGCACCATGATCGCCTTGGCGGCACCGCTACAGATCCGCCTCATGGACATTGCCCATGA > NC_002947/3812545‑3812671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |