New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3843167 =	64 (1.090)	4 (0.070)	4/250	NT	6.1%	coding (310/525 nt)	PP_3392	hypothetical protein
	?	NC_002947	3843212 =	62 (1.100)					coding (265/525 nt)	PP_3392	hypothetical protein

GGCCAGCACAGCAACGTGCAGGAGGGTGCTGTCTTGCATGCCGACCCCGGCTTTGCGTTGACAGTGGGGCAAGGTGTCACCATCGGCCACCAGGCCATGCTGCACGGCTGCACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3843320‑3843167 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgcAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGTGCTGGCCGATACGGATCGCTTCGTTGTCGCCCCGTAGCACG  >  NC_002947/3843212‑3843354                                                                                                                                                                                                                                                                                                           GGCCAGCACAGCAACGTGCAGGAGGGTGCTGTCTTGCATGCCGACCCCGGCTTTGCGTTGACAGTGGGGCAAGGTGTCACCATCGGCCACCAGGCCATGCTGCACGGCTGCACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGT                                                                                                                                                      <  5:260139/149‑1  GCCAGCACAGCAACGTGCAGGAGGGTGCTGTCTTGCATGCCGACCCCGGCTTTGCGTTGACAGTGGGGCAAGGTGTCACCATCGGCCACCAGGCCATGCTGCACGGCTGCACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTG                                                                                                                                                     >  1:150361/1‑149   CCAGCACAGCAACGTGCAGGAGGGTGCTGTCTTGCATGCCGACCCCGGCTTTGCGTTGACAGTGGGGCAAGGTGTCACCATCGGCCACCAGGCCATGCTGCACGGCTGCACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTGG                                                                                                                                                    <  8:84638/149‑1                                                                                                            CTGCACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTGGTGCAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGT                                           >  5:111269/1‑149                                                                                                               CACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTGGTGCAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGT                                           <  3:184416/146‑1                                                                                                               CACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTGGTGCAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGT                                           >  4:184416/1‑146                                                                                                                          ATGGCGCGCTGATCGGCATTCAGGCGGTGGTGCAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGTGCTGGCCGATACGG                             <  6:111269/149‑1                                                                                                                                                     TGGTGCAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGTGCTGGCCGATACGGATCGCTTCGTTGTCGCCCCGTAGCACG  <  5:192720/149‑1                                                                                                                                                          CAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGTGCTGGCCGATACGGATCGCTTCG                    <  1:206010/126‑1                                                                                                                                                          CAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGTGCTGGCCGATACGGATCGCTTCG                    >  2:206010/1‑126                                                                                                                                                                                                                                                                                                           GGCCAGCACAGCAACGTGCAGGAGGGTGCTGTCTTGCATGCCGACCCCGGCTTTGCGTTGACAGTGGGGCAAGGTGTCACCATCGGCCACCAGGCCATGCTGCACGGCTGCACCATCGGCGATGGCGCGCTGATCGGCATTCAGGCGGTGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3843320‑3843167 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgcAGCCGTGCAGCATGGCCTGGTGGCCGATGGTGACACCTTGCCCCACTGTCAACGCAAAGCCGGGGTCGGCATGCAAGACAGCACCCTCCTGCACGTTGCTGTGCTGGCCGATACGGATCGCTTCGTTGTCGCCCCGTAGCACG  >  NC_002947/3843212‑3843354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.