New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3881637 =	57 (0.970)	8 (0.140)	7/246	NT	13.5%	coding (296/1416 nt)	oprN	multidrug RND transporter outer membrane protein OprN
	?	NC_002947	3881700 =	49 (0.890)					coding (359/1416 nt)	oprN	multidrug RND transporter outer membrane protein OprN

GCTGGCTTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3881791‑3881637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccacc‑‑gAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGCCGCCGCCGACCTGCAACAGTTGCAGGTCAGC  >  NC_002947/3881700‑3881842                                                                                                                                                                                                                                                                                                              GCTGGCTTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGA                                                                                                                                                         >  2:348854/1‑149  CTGGCTTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGTCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGAC                                                                                                                                                        <  1:82419/149‑1       TTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑G                                                                                                                                                 >  3:64749/1‑149       TTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑G                                                                                                                                                 >  3:251488/1‑149       TTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGACGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑G                                                                                                                                                 >  3:213017/1‑149                                                    CATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑Gtgaa                                                                                                                                             <  8:57720/108‑5                                                                                 TATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACCGGGAACGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATC                                                                          >  6:226708/1‑148                                                                                 TATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACCGGGAACGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATC                                                                          >  7:166389/1‑148                                                                                           CTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATC                                                              >  3:77842/1‑148                                                                                             CGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGC                                                                                                                 >  5:158911/1‑95                                                                                             CGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGC                                                                                                                 <  6:158911/95‑1                                                                                                                   GCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCG                                      <  4:77842/148‑1                                                                                                                          CCGAGATCGCTGCTGGCACGGCTGGTGACCACCGGGAACGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGC                                 <  5:226708/148‑1                                                                                                                                             GGCTGGTGACCACCGGGAACGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGCCGCCGCCGACCTGCAACAGT             <  8:166389/149‑1                                                                                                                                                    GACCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGCCGCCGCCG                         <  2:25421/128‑1                                                                                                                                                    GACCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGCCGCCGCCG                         >  1:25421/1‑128                                                                                                                                                      CCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTTCCGCCGCCGACCTGCAACAGTTGCAGGTCAGC  <  5:336656/149‑1                                                                                                                                                      CCACC‑‑GAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGCCGCCGCCGACCTGCAACAGTTGCAGGTCAGC  <  6:27538/149‑1                                                                                                                                                                                                                                                                                                              GCTGGCTTCGATCTGGCGCTGGATGCGCCCGAACAGGTCAAGCTCCCAGGCCATGTCCAGGCCCAGGTCGTAGCGCTCGCTATTGACCCGCTCGGTGGTCTGGCCGGGGATCTGGCCTTTGCCGAGATCGCTGCTGGCACGGCTGGTGACCACC‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3881791‑3881637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccacc‑‑gAGCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCCTGGGAGCTTGACCTGTTCGGGCGCATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCGGTTGCCGCCGCCGACCTGCAACAGTTGCAGGTCAGC  >  NC_002947/3881700‑3881842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.