New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3913878	50 (0.850)	3 (0.050)	3/244	NT	5.6%	coding (201/1302 nt)	PP_3453	sensor protein RstB
	?	NC_002947	= 3913915	54 (0.980)					coding (164/1302 nt)	PP_3453	sensor protein RstB

GTCCAGCGGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3913722‑3913878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagttccGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCAGTGATTTCGCACCGCTGGAACTGCAGCTGCTGCGCAGGGATCAGGCCGGTTTGAGCGATGAGGAGCAGGCGCGCCTGGAGCAGGGTCTGTACGCAGTGC  <  NC_002947/3913915‑3913769                                                                                                                                                                                                                                                                                                                  GTCCAGCGGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGG                                                                                                                                                             >  5:146852/1‑149  TCCAGCGGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGC                                                                                                                                                            <  3:106829/149‑1    CAGCGGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCA                                                                                                                                                          <  7:208121/149‑1      GCGGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGT                                                                                                                                                        <  2:223005/149‑1        GGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTC                                                                                                                                                      <  2:71625/149‑1         GCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTCC                                                                                                                                                     <  7:44151/149‑1                                                          CAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTCCGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCA                                                                                                     <  5:330056/148‑1                                                                                             TCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTCCGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCA                                                                                                                <  3:99123/102‑1                                                                                             TCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTCCGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCA                                                                                                                >  4:99123/1‑102                                                                                                                                                      CCAGTTCCGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCAGTGATTTCGCACCGCTGGAACTGCAGCTGCTGCGCAGGGATCAGGCCGGTTTGAGCGATGAGGAGCAGGCGCGCCTGGAGCAGGGTCTGTACG        <  2:225545/149‑1                                                                                                                                                          TTCCGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCAGTGATTTCGCACCGCTGGAACTGCAGCTGCTGCGCAGGGATCAG                                                         >  3:175867/1‑96                                                                                                                                                          TTCCGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCAGTGATTTCGCACCGCTGGAACTGCAGCTGCTGCGCAGGGATCAG                                                         <  4:175867/96‑1                                                                                                                                                             CGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCAGTGATTTCGCACCGCTGGAACTGCAGCTGCTGCGCAGGGATCAGGCCGGTTTGAGCGATGAGGAGCAGGCGCGCCTGGAGCAGGGTCTGTACGCAGTGC  <  4:324252/148‑1                                                                                                                                                                                                                                                                                                                  GTCCAGCGGCGCCAACACCGTCTCGTAATAGCCCCACTCGGCAATGCGCACTGCGTACAGACCCTGCTCCAGGCGCGCCTGCTCCTCATCGCTCAAACCGGCCTGATCCCTGCGCAGCAGCTGCAGTTCCAGCGGTGCGAAATCACTGGCCAGTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3913722‑3913878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagttccGCCAGGCTCCGCGCGAGCAGTGGCCAGCGGTGGAGCAGGAACTGGCCAGTGATTTCGCACCGCTGGAACTGCAGCTGCTGCGCAGGGATCAGGCCGGTTTGAGCGATGAGGAGCAGGCGCGCCTGGAGCAGGGTCTGTACGCAGTGC  <  NC_002947/3913915‑3913769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.