| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3971392 | NA (NA) | 4 (0.070) | 3/254 | NT | NA | coding (1311/1536 nt) | PP_3501 | transposase |
| ? | NC_002947 | = 3971433 | NA (NA) | coding (1352/1536 nt) | PP_3501 | transposase | |||||
TCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971241‑3971392‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCA < NC_002947/3971433‑3971286 TCCTCAAAACACTTCATGACTGGATGTTCGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAAC < 5:8477/149‑1TCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAAC > 4:98158/1‑149 CCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAAC > 3:238197/1‑148 TCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAG > 6:25693/1‑149 TCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAG > 6:101265/1‑149 AAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAG < 2:37251/147‑1 AACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAAC < 3:286081/142‑1 AACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAAC > 4:286081/1‑142 ATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCCTCGACAACAACCACTTAGAGaac > 8:130046/1‑143 ATCAGCCACAGCCAAAGCCCTCGACTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAACCAGTTCGAGCGCCCGAGTGCCCATGGCCGTATCTGGTTCTCGACCTGATTGTTGT < 3:5921/149‑1 TCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTG < 8:248381/125‑1 TCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTG > 7:248381/1‑125 CCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGCCCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGG > 5:199026/1‑149 CCAGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGG < 1:238031/149‑1 CAGTTCGAGCGCCCGAGTGGCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAGCTCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTG < 1:110667/149‑1 AGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGC < 5:210866/149‑1 AGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGC < 4:43130/149‑1 AGTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGC < 1:1127/149‑1 GTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCA > 5:254082/1‑149 GTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCA > 4:238197/1‑149 TCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGACAACAACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971241‑3971392‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagTTCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTTGTCGATGGGCACAGCCCCATCGTCCAGGTAG‑‑CGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCA < NC_002947/3971433‑3971286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |