| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4030724 = | 57 (0.970) | 4 (0.070) | 4/256 | NT | 6.7% | coding (387/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | 4030785 = | 55 (0.960) | coding (448/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein | |||||
GGATCAGCCCCAGGTCAGTGCCGGCATGGGGTTCGGTCAGGCACATGGTGCCGGCCCAGCGGCCTTCGTACAGCGGTGGCAGGTAAGTGGCCTTGAGCGCTTCGCTGGCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4030872‑4030724‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCGCACCCGCGCCGAGCCTCAGGCCGATGGCAGCGTGCGCATCAGTGGCAGCAAGATCTTCA > NC_002947/4030785‑4030932 GGATCAGCCCCAGGTCAGTGCCGGCATGGGGTTCGGTCAGGCACATGGTGCCGGCCCAGCGGCCTTCGTACAGCGGTGGCAGGTAAGTGGCCTTGAGCGCTTCGCTGGCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCC < 6:343029/149‑1GGATCAGCCCCAGGTCAGTGCCGGCATGGGGTTCGGTCAGGCACATGGTGCCGGCCCAGCGGCCTTCGTACAGCGGTGGCAGGTAAGTGACCTTGAGCGCTTCGCTGGCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCC < 8:46777/149‑1 GTGGCCTTGAGCGCTTCGCTGGCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCCACTTACATGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGAT > 7:347438/1‑149 GCCTTGAGCGCTTCGCTGGCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCCACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCG > 7:235568/1‑149 GCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCCACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCGCACCCGCGCCGAGCCT < 8:347438/147‑1 CAGGCAGCTGCCTGCGCTCAATGCCACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCGCACCCGCGCCGAGCCTCAGGCCGATGGCAGCGTGC < 8:235568/149‑1 CCACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCGCACCCGCGCCGAGCCTCAGGCCGATGGCAGCGTGCGCATCAGTGGCAGCAAGATCTTC < 3:202106/149‑1 CACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCGCACCCGCGCCGAGCCTCAGGCCGATGGCAGCGTGCGCATCAGTGGCAGCAAGATCTTCA > 5:149660/1‑149 GGATCAGCCCCAGGTCAGTGCCGGCATGGGGTTCGGTCAGGCACATGGTGCCGGCCCAGCGGCCTTCGTACAGCGGTGGCAGGTAAGTGGCCTTGAGCGCTTCGCTGGCGTGGGCATCGATCGCCAGGCAGCTGCCTGCGCTCAATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4030872‑4030724‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACTTACCTGCCACCGCTGTACGAAGGCCGCTGGGCCGGCACCATGTGCCTGACCGAACCCCATGCCGGCACTGACCTGGGGCTGATCCGCACCCGCGCCGAGCCTCAGGCCGATGGCAGCGTGCGCATCAGTGGCAGCAAGATCTTCA > NC_002947/4030785‑4030932 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |