New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4351505 =	56 (0.950)	3 (0.060)	3/238	NT	5.4%	coding (245/654 nt)	PP_3823	cytochrome c‑type protein
	?	NC_002947	4351593 =	54 (1.010)					coding (157/654 nt)	PP_3823	cytochrome c‑type protein

TTCACCCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4351662‑4351505 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagccgcaaTGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGGCATGTGCCGCGGGCCAGGCCAGGATCAGCAAGCTGCCGATCATCACGCGTCTCAAC  >  NC_002947/4351593‑4351738                                                                                                                                                                                                                                                                                                                  TTCACCCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGG                                                                                                                                                             >  3:340195/1‑149   CACCCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGG                                                                                                                                                             <  8:154566/147‑1    ACCCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAG                                                                                                                                                          >  8:144444/1‑149      CCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCC                                                                                                                                                        <  7:144444/149‑1      CCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCC                                                                                                                                                        >  8:286451/1‑149                                                                      ATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCC                                                                                        >  7:116798/1‑149                                                                           GGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGG                                                                                   >  2:142608/1‑149                                                                                         CACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAG                                                                                                                                                          >  4:184409/1‑64                                                                                                    GGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGG                                                          <  8:116798/149‑1                                                                                                                                                       AGCCGCAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGGAGCCCTTCTGACCGTCGGCGGCCTGTGGCGCGGGCCAGGCCAGGCTCAGCAAGCTGCCGCTCATCACGCGTC       >  2:228860/1‑149                                                                                                                                                         CCGCAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGTAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGGCATGTGCCGCGGGCCAGGCCAGGATCAGCAAGCTGCCGATCATCACGCGTCT      >  7:126374/1‑148                                                                                                                                                         CCGCAATGCCATAGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGGCATGTGCCGCGGGCCAGGCCAGGATCAGCAAGCTGCCGATCATCACGCGTCT      >  5:101395/1‑148                                                                                                                                                          CGCAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGGCATGTGCCGCGGGCCAGGCCAGGATCAGCAAGCTGCCGATCATCACGCGTCTC     >  1:15549/1‑148                                                                                                                                                            CAATGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGGCATGTGCCGCGGGCCAGGCCAGGATCAGCAAGCTGCCGATCATCACGCGTCTCAAC  <  2:347428/149‑1                                                                                                                                                                                                                                                                                                                  TTCACCCAGGGGGGGGCCAACCCCGCCGCCATGGCCTGCCTGGGTTGCCACGGCCCGGACGGCAATGGCATTGCGGCTGCCGGCTTTCCACGTTTGGCCGGGCTACCGGCCGGTTATCTTGCCAAGCAGTTGCAGGACTGGCGCAACGGCAGCCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4351662‑4351505 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagccgcaaTGCCATTGCCGTCCGGGCCGTGGCAACCCAGGCAGGCCATGGCGGCGGGGTTGGCCCCCCCCTGGGTGAAGACCTTCTGACCGTCGGCGGCATGTGCCGCGGGCCAGGCCAGGATCAGCAAGCTGCCGATCATCACGCGTCTCAAC  >  NC_002947/4351593‑4351738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.