| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4530896 | 53 (0.900) | 3 (0.050) | 3/250 | NT | 5.1% | coding (735/1962 nt) | topB | DNA topoisomerase III |
| ? | NC_002947 | = 4530926 | 60 (1.070) | coding (765/1962 nt) | topB | DNA topoisomerase III | |||||
CTACCTTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCAACTTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4530745‑4530896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGTCGTCGCAGGCGTCTTCGGGGGCGCGCCATTGGGCATTGAAGCGTTGGCCGGCGTGTTCCAGCTGTACGTCGATGGCCCAGAACGGCACCGGCACGAAGTTGG < NC_002947/4530926‑4530784 CTACCTTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCAACTTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGC > 4:147200/1‑149CTACCTTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCAACTTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGC < 4:19069/149‑1CTACCTTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCAACTTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGC > 8:193551/1‑149 TTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGCCGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCC < 7:325581/144‑1 TTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGCCGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCC > 8:325581/1‑144 CGTGCCGGTGCCGGTCTGGGCCATCGACGTACAGCGGGACCACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGCCGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGT < 8:290221/147‑1 GGCCGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGTCGTCGCAGGCGTCTTCGGGGGCGCGCCATTGGGCATTGAAGCGTTGGCCGGCGTGTTCCAGCTGTACGTCGATGGCCCAGAACGGCACCGGCACGAAGTTGG < 1:117494/149‑1 GCCGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGTCGTCGCAGGCGTCTTCGGGGGCGCGCCATTGGGCATTGAAGCGTTGGCCGGCGTGTTCCAGCTGT < 1:259802/111‑1 GCCGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGTCGTCGCAGGCGTCTTCGGGGGCGCGCCATTGGGCATTGAAGCGTTGGCCGGCGTGTTCCAGCTGT > 2:259802/1‑111 CGCGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGTCGTCGCAGGCGTCTTCGGGGGCGCGCCATTGGGCATTGAAGCGTTGGC > 2:270964/1‑92 CTACCTTGCGCCTGGTGGTCGACCGCGACCGCAGCATCGCCAACTTCGTGCCGGTGCCGTTCTGGGCCATCGACGTACAGCTGGAACACGCCGGCCAACGCTTCAATGCCCAATGGCGCGCCCCCGAAGACGCCTGCGACGACCAAGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4530745‑4530896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGGCCTGCTGAGCCAGGCTTTGCTTCAGGCAGCGGCCTTGGTCGTCGCAGGCGTCTTCGGGGGCGCGCCATTGGGCATTGAAGCGTTGGCCGGCGTGTTCCAGCTGTACGTCGATGGCCCAGAACGGCACCGGCACGAAGTTGG < NC_002947/4530926‑4530784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |