| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4536700 = | NA (NA) | 4 (0.070) | 3/252 | NT | 5.5% | coding (35/1533 nt) | PP_4025 | transposase |
| ? | NC_002947 | = 4627423 | 71 (1.210) | coding (81/1533 nt) | PP_4091 | transposase | |||||
GGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGggtcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4536847‑4536700‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCCCCAACTGGCGTTGTTCAATGAACCCGAAAGTCAGTGGGTTCCTACCG < NC_002947/4627423‑4627275 GGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGG < 5:222105/149‑1GGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCAGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGG < 2:156612/149‑1 GCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGG > 7:113573/1‑149 GCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGG > 6:122888/1‑149 GTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTC < 1:158438/149‑1 GTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTC < 7:149819/149‑1 GTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTC < 5:345721/149‑1 TGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTCG > 8:109171/1‑149 CTTTGTCGACCGTGCGCTCGGCCAACAAGTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGT > 1:207003/1‑149 CTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGT > 3:124816/1‑149 TCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAAC > 3:226548/1‑149 GACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGGGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACAC > 3:212296/1‑149 GGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCCCCAACTGGCGTTGTTCAATGAACCCGAAAGTCAGTGGGTTCCTACCG > 5:115614/1‑149 GGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCCCCAACTGGCGTTGTTCAATGAACCCGAAAGTCAGTGGGTTCCTACCG > 2:174693/1‑149 GGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCCCCAACTGGCGTTGTCCAATGAACCCGAAAGTCAGT < 5:217301/137‑1 GGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCCCCAACTGGCGTTGTCCAATGAACCCGAAAGTCAGT > 6:217301/1‑137 GACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAG > 5:234769/1‑75 GACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAG < 6:234769/75‑1 GGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGTGCGCTCGGCCAACAACTGCGCAAGCAGTAGTTTGAGCGCGGCAGggtcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4536847‑4536700‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTCGACAAAGGTCAGATCGTCGATCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCCCCAACTGGCGTTGTTCAATGAACCCGAAAGTCAGTGGGTTCCTACCG < NC_002947/4627423‑4627275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |