New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4845770 = | 60 (1.020) | 5 (0.090) | 5/254 | NT | 8.0% | coding (520/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
? | NC_002947 | 4845817 = | 57 (1.000) | coding (567/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
GAATTGTCAGGAACAGCGCCACCCAGCGCAGGATGGCATGCAACTCGGGTGTCAGGTCGATGTTGAATTCCGGCCAAGTGGCCATGGTCGCCATCATCGCCTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845920‑4845770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT > NC_002947/4845817‑4845951 GAATTGTCAGGAACAGCGCCACCCAGCGCAGGATGGCATGCAACTCGGGTGTCAGGTCGATGTTGAATTCCGGCCAAGTGGCCATGGTCGCCATCATCGCCTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGG > 4:237833/1‑149 CTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGCCACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGA > 4:197046/1‑149 AACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAAT > 8:193157/1‑149 CCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCT > 5:325510/1‑141 CCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCT < 6:325510/141‑1 GGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGTGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCT < 7:193157/149‑1 TCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT > 3:345295/1‑136 TCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT < 4:345295/136‑1 GAATTGTCAGGAACAGCGCCACCCAGCGCAGGATGGCATGCAACTCGGGTGTCAGGTCGATGTTGAATTCCGGCCAAGTGGCCATGGTCGCCATCATCGCCTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845920‑4845770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT > NC_002947/4845817‑4845951 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |