New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4845770 =60 (1.020)5 (0.090) 5/254 NT 8.0% coding (520/2475 nt) PP_4261 cation‑transporting P‑type ATPase
?NC_002947 4845817 = 57 (1.000)coding (567/2475 nt) PP_4261 cation‑transporting P‑type ATPase

GAATTGTCAGGAACAGCGCCACCCAGCGCAGGATGGCATGCAACTCGGGTGTCAGGTCGATGTTGAATTCCGGCCAAGTGGCCATGGTCGCCATCATCGCCTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4845920‑4845770
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT  >  NC_002947/4845817‑4845951
                                                                                                                                                                                                                                                                                              
GAATTGTCAGGAACAGCGCCACCCAGCGCAGGATGGCATGCAACTCGGGTGTCAGGTCGATGTTGAATTCCGGCCAAGTGGCCATGGTCGCCATCATCGCCTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGG                                                                                                                                           >  4:237833/1‑149
                                                                                                    CTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGCCACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGA                                       >  4:197046/1‑149
                                                                                                        AACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAAT                                   >  8:193157/1‑149
                                                                                                          CCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCT                                         >  5:325510/1‑141
                                                                                                          CCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCT                                         <  6:325510/141‑1
                                                                                                                      GGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTTCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGTGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCT                     <  7:193157/149‑1
                                                                                                                                                      TCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT  >  3:345295/1‑136
                                                                                                                                                      TCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT  <  4:345295/136‑1
                                                                                                                                                                                                                                                                                              
GAATTGTCAGGAACAGCGCCACCCAGCGCAGGATGGCATGCAACTCGGGTGTCAGGTCGATGTTGAATTCCGGCCAAGTGGCCATGGTCGCCATCATCGCCTGGAACCACAGCAGCCCGGCCACGCCCAGGCGGCGTAGGGCGCTGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4845920‑4845770
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttCCAGGCGATGATGGCGACCATGGCCACTTGGCCGGAATTCAACATCGACCTGACACCCGAGTTGCATGCCATCCTGCGCTGGGTGGCGCTGTTCCTGACAATTCCCATCGTGTTCTACAGCTGCGCGCCCTTCTT  >  NC_002947/4845817‑4845951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.