| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4903448 | 51 (0.870) | 6 (0.110) | 5/248 | NT | 10.8% | coding (679/1194 nt) | PP_4311 | D‑amino acid dehydrogenase small subunit |
| ? | NC_002947 | = 4903505 | 51 (0.910) | coding (622/1194 nt) | PP_4311 | D‑amino acid dehydrogenase small subunit | |||||
GGTCAGGCTGTAGCCCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4903299‑4903448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCAGGGCCAGGTCGTGGCACTGCAACTGGGCGATCAGCAGCTGGACGTGGAGCAGTTGGTGCTGTGTGCCGGGCATCGCGGCC < NC_002947/4903505‑4903361 GGTCAGGCTGTAGCCCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCT < 7:243825/149‑1 GTCAGGCTGTAGCCCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCT > 8:345042/1‑148 TCAGGCTGTAGCCCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTG > 6:203192/1‑148 GTAGCCCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTGTTGCGCGC > 1:288092/1‑149 CCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTGTTGCGCGCGTCGG > 6:37722/1‑149 GCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTGTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCA < 5:37722/149‑1 GATGCCCGGCACACATCACCAACTGCTCCACGTCCAGATGCTGATCTCCCAGTTGGAGTGCCACGACCTGGCCCTGGCGCTGTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGTCCGGCCTGTGACGCAATTGGTTCAGCGCCAGG < 2:288092/149‑1 GCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTGTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCAGG > 5:44056/1‑134 GCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTGTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCAGG < 6:44056/134‑1 TGTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCAGGGCCAGGTCGTGGCACTGCAACTGGGCGATCAGCAGCTGGACGTGGAGCAGTTGGTGCTGTGTGCCGGGCATCGCGGCC > 5:196761/1‑147 TGTTGCGCGCGTAGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCAGGGCCAGGTCGTGGCACTGCAACTGGGCGATCAGCAGCTGGACGTGGAGCAGTTGGTGCTGTGTGCCGGGCATCGCGGCC > 2:96398/1‑147 GGTCAGGCTGTAGCCCTTCAGCGGGTAAACCGGTATCTGCACCCCCGGTAATGCCAAGCCTGGGCCGCGATGCCCGGCACACAGCACCAACTGCTCCACGTCCAGCTGCTGATCGCCCAGTTGCAGTGCCACGACCTGGCCCTGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4903299‑4903448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgTTGCGCGCGTCGGGCCAGTGCCGTTTCCTGCTTGGCCGGCCGGTGACGCAATTGGTTCAGCGCCAGGGCCAGGTCGTGGCACTGCAACTGGGCGATCAGCAGCTGGACGTGGAGCAGTTGGTGCTGTGTGCCGGGCATCGCGGCC < NC_002947/4903505‑4903361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |