| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5112165 = | 52 (0.880) | 7 (0.120) | 5/250 | NT | 11.7% | coding (247/1068 nt) | rluB | 23S rRNA pseudouridylate synthase B |
| ? | NC_002947 | 5112210 = | 56 (1.000) | coding (202/1068 nt) | rluB | 23S rRNA pseudouridylate synthase B | |||||
ACGTCGAGGCCTGGATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112314‑5112165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcaGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAG > NC_002947/5112210‑5112357 ACGTCGAGGCCTGGATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGA > 6:168821/1‑147ACGTCGAGGCCTGGATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGA < 5:168821/147‑1 CGTCGAGGCCTGGATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCA < 4:277133/149‑1 GATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGAT > 1:238262/1‑135 GATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGAT < 2:238262/135‑1 GCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCC > 5:247599/1‑149 GCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCC > 5:242280/1‑149 AGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTC > 2:42001/1‑148 GCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGA > 1:317331/1‑149 GCGCGAGGAGGCCGCCGAGGCCACCCG‑CGCTTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCG > 8:312724/1‑149 AGGCCGCCGAGGCCACCCGCCGGGTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCC < 6:242280/149‑1 AGGCCGCCGAGGCCACCCGCCGGGTGATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCC < 6:247599/149‑1 GATCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTC < 4:20925/148‑1 TCAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTG > 4:303917/1‑148 CAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTG > 1:71005/1‑147 CAGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTG > 7:276831/1‑147 AGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAG > 7:76465/1‑149 AGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCA < 7:300981/148‑1 ACGTCGAGGCCTGGATCAGCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112314‑5112165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcaGCTTGCCGTCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAG > NC_002947/5112210‑5112357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |