New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5140292 = | 69 (1.170) | 5 (0.090) | 5/248 | NT | 7.6% | intergenic (+4/+376) | PP_4524/PP_4525 | sodium‑solute symporter/LysR family transcriptional regulator |
? | NC_002947 | 5140348 = | 57 (1.020) | intergenic (+60/+320) | PP_4524/PP_4525 | sodium‑solute symporter/LysR family transcriptional regulator |
CAGCGCAAACGTCAACCGCGTCGGCGCTGATTAACGACAAAGGCCGCTTCACCCGAGTGGGTGCAGCGGCCTTTTTGTGTCTGCTGATTTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5140444‑5140292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtacagGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTGGTGGGATCAGCCC > NC_002947/5140348‑5140495 CAGCGCAAACGTCAACCGCGTCGGCGCTGATTAACGACAAAGGCCGCTTCACCCGAGTGGGTGCAGCGGCCTTTTTGTGTCTGCTGATTTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGT < 1:142302/149‑1 GCGCAAACGTCAACCGCGTCGGCGCTGATTAACGACAAAGGCCGCTTCACCCGAGTGGGTGCAGCGGCCTTTTTGTGTCTGCTGATTTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTAC < 7:48941/149‑1 GCGCAAACGTCAACCGCGTCGGCGCTGATTAACGACAAAGGCCGCTTCACCCGAGTGGGTGCAGCGGCCTTTTTGTGTCTGCTGATTTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTA > 2:126511/1‑148 AAACGTCAACCGCGTCGGCGCTGATTAACGACAAAGGCCGCTTCACCCGAGTGGGTGCAGCGGCCTTTTTGTGTCTGCTGATTTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTACAG > 7:158883/1‑147 TTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCTGGTACAGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTT > 2:352837/1‑149 CTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTACAGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCATTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGC > 4:361117/1‑149 CCTTTCGCGGGCAAGCCCGCTGCTACAAGCGAAAGGGCCGGTACAGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGT < 5:320437/129‑1 CCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTACAGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGT > 6:320437/1‑129 TCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCTGGTACAGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCAT < 1:352837/147‑1 ACAGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTGGTGGGATCAG > 5:328198/1‑149 AGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTGGTGGGATCAGCC < 4:129904/149‑1 AGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTG < 1:364910/137‑1 AGGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTG > 2:364910/1‑137 GGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTGGTGGGATCAGCCC > 1:200874/1‑149 GGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTGGTGGGATCAGCCC > 3:246082/1‑149 CAGCGCAAACGTCAACCGCGTCGGCGCTGATTAACGACAAAGGCCGCTTCACCCGAGTGGGTGCAGCGGCCTTTTTGTGTCTGCTGATTTCTATTGCCTGTACCAGCCCTTTCGCGGGCAAGCCCGCTCCTACAAGCGAAAGGGCCGGTACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5140444‑5140292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtacagGCAATAGAAATCAGCAGACACAAAAAGGCCGCTGCACCCACTCGGGTGAAGCGGCCTTTGTCGTTAATCAGCGCCGACGCGGTTGACGTTTGCGCTGCTCTTCATCAGTCGGGATCGGCACCGGCTGCAAGGGTGGTGGGATCAGCCC > NC_002947/5140348‑5140495 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |