| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5203884 = | 79 (1.340) | 5 (0.090) | 4/252 | NT | 6.7% | intergenic (+148/‑312) | PP_4583/yajD | putative Peptidase/endonuclease |
| ? | NC_002947 | 5203916 = | 64 (1.130) | intergenic (+180/‑280) | PP_4583/yajD | putative Peptidase/endonuclease | |||||
TTGATGGCTGGCCTGCCCCTGGCAGAAGCTGCCAGCACGCCACCTCGTCTCAATACGCCAGTGCCTGGTGCACCGGGTACGCCTACGCCCACGCCATACCCGCAGATAACCCCGAGTACACCGCCCAAGGCTTACGACAGCCAGCCGGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5204036‑5203884‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGGCAGCTTCTGCCAGGGGCAGGCCAGCCATCAACAGCGCGGCGAGGATCGCGTGA > NC_002947/5203916‑5204058 TTGATGGCTGGCCTTCCCCTGGCAGAAGCTGCCAGCACGCCACCTCGTCTCAATACGCCAGTGCCTGGTGCACCGGGTACGCCTACGCCCACGCCATACCCGCAGATAACCCCGAGTACACCGCCCAAGGCTTACGACAGCCAGCCGGG < 1:184621/149‑1TTGATGGCTGGCCTGCCCCTGGCAGAAGCTGCCAGCACGCCACCTCGTCTCAATACGCCAGTGCCTGGTGCACCGGGTACGCCTACGCCCACGCCATACCCGCAGATAACCCCGAGTACACCGCCCAAGGCTTACGACAGCCAGCCGGG > 4:104561/1‑149 AGATAACCCCGAGTACACCGCCCAAGGCTTACGACAGCCAGCCGGGGGCGGTGTACTCGGGGTTTTCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGGCAGCTTCTG > 1:261698/1‑149 CGCCCAAGGCTTACGACAGCCAGCCGGGGGCGGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGG < 3:294662/122‑1 CGCCCAAGGCTTACGACAGCCAGCCGGGGGCGGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGG > 4:294662/1‑122 CCCAAGGCTTACGACAGCCAGCCGGGGGCGGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGGCAGCTTCTGCCAGGGGCAGGCCAGCCAT > 4:131922/1‑148 CCCAAGGCTTACGACAGCCAGCCGGGGGCGGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGGCAGCTTCTGCCAGGGGCAGGCCAGCCAT > 6:341973/1‑148 GGGCGGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGGCAGCTTCTGCCAGGGGCAGGCCAGCCATCAACAGCGCGGCGAGGATCGCGTGA < 7:269177/148‑1 TTGATGGCTGGCCTGCCCCTGGCAGAAGCTGCCAGCACGCCACCTCGTCTCAATACGCCAGTGCCTGGTGCACCGGGTACGCCTACGCCCACGCCATACCCGCAGATAACCCCGAGTACACCGCCCAAGGCTTACGACAGCCAGCCGGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5204036‑5203884‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgGTGTACTCGGGGTTATCTGCGGGTATGGCGTGGGCGTAGGCGTACCCGGTGCACCAGGCACTGGCGTATTGAGACGAGGTGGCGTGCTGGCAGCTTCTGCCAGGGGCAGGCCAGCCATCAACAGCGCGGCGAGGATCGCGTGA > NC_002947/5203916‑5204058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |