| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5292430 = | 58 (0.980) | 4 (0.070) | 4/242 | NT | 6.5% | coding (420/888 nt) | mmsB | 3‑hydroxyisobutyrate dehydrogenase |
| ? | NC_002947 | 5292484 = | 61 (1.120) | coding (366/888 nt) | mmsB | 3‑hydroxyisobutyrate dehydrogenase | |||||
CGCCGACCGTTGACTGCAGCACCATCGACCCGCAGACCGCACGTGACGTGTCCAAGGCCGCAGCGGCAAAGGGCGTGGACATGGGGGATGCGCCGGTTTCCGGTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5292587‑5292430‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagtaccACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTGCCAGGACGAATACCGGCCAGTACGCCGTCCTCGTTCAAG > NC_002947/5292484‑5292628 CGCCGACCGTTGACTGCAGCACCATCGACCCGCAGACCGCACGTGACGTGTCCAAGGCCGCAGCGGCAAAGGGCGTGGACATGGGGGATGCGCCGGTTTCCGGTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGC < 7:251300/149‑1 CGTTGACTGCAGCACCATCGACCCGCAGACCGCACGTGACGTGTCCAAGGCCGCAGCGGCAAAGGGCGTGGACATGGGGGATGCGCCGGTTTCCGGTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTA > 1:257773/1‑149 TGCAGCACCATCGACCCGCAGACCGCACGTGACGTGTCCAAGGCCGCAGCGGCAAAGGGCGTGGACATGGGGGATGCGCCGGTTTCCGGTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTAC > 1:123067/1‑143 TGCAGCACCATCGACCCGCAGACCGCACGTGACGTGTCCAAGGCCGCAGCGGCAAAGGGCGTGGACATGGGGGATGCGCCGGTTTCCGGTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTAC < 2:123067/143‑1 GTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTACCACCGGAAACGTGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTC < 5:353771/116‑1 GTGGAACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTTCGGCCTTGAACACGTC > 6:353771/1‑116 GTACTGGCGGTGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCA < 3:244753/48‑1 GTACTGGCGGTGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCA > 4:244753/1‑48 TGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCA > 3:112812/1‑139 TGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCA < 4:112812/139‑1 GTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCATTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTGCCAGGACGAATACCGGCCAGTACGCCGTCCTCGTTCAA < 6:242776/149‑1 TACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTGCCAGGACGAATACCGGCCAGTACGCCGTCCTCGTTCAAG < 5:145191/149‑1 CGCCGACCGTTGACTGCAGCACCATCGACCCGCAGACCGCACGTGACGTGTCCAAGGCCGCAGCGGCAAAGGGCGTGGACATGGGGGATGCGCCGGTTTCCGGTGGTACTGGCGGCGCGGCGGCCGGCACCCTGACGTTCATGGTCGGCGCCAGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5292587‑5292430‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagtaccACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTGCCAGGACGAATACCGGCCAGTACGCCGTCCTCGTTCAAG > NC_002947/5292484‑5292628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |