| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5304443 = | 74 (1.260) | 4 (0.070) | 4/248 | NT | 5.8% | coding (2809/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| ? | NC_002947 | 5304517 = | 61 (1.090) | coding (2735/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit | |||||
GAGCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5304596‑5304443‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcgTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGGGTCGGCGCTTCCAGCGCCTCAAAGTACACCTTCAAGCGCTGGCTGAAGAAGTGC > NC_002947/5304517‑5304660 GAGCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTT > 1:136132/1‑149GAGCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTT > 3:50764/1‑149GAGCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTT > 5:290146/1‑149 AGCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTC < 6:158512/149‑1 GCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCG < 4:50764/149‑1 CTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAGCCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGC > 1:78065/1‑148 CTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGC > 6:250598/1‑148 AAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGG < 8:211466/108‑1 AACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATC > 5:23924/1‑149 GACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGA > 8:28620/1‑149 CGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGG < 7:28620/148‑1 GGTCTGCTGCCGCTAGCCGGTTTCGGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGGGTCGGCGCTTCCAGCGCCTCAAAGTACACCT < 6:23924/149‑1 TTCGGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGGGTCGGCGCTTCCAGCGCCTCAAAGTACACCTTCAAGCGCTGGCTGAAGAAGT < 5:54799/149‑1 GGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGGGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGGGTCGGCGCTTCCAGCGCCTCAAAGTACACCTTCAAGCGCTGGCTGAAGAAGTGC < 6:181749/148‑1 GGCGTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGGGTCGGCGCTTCCAGCGCCTCAAAGTACACCTTCAAGCGCTGGCTGAAGAAGTGC < 1:125661/148‑1 GAGCCCTTCGTCCTCGATACCCTGCAACGCTACGGCGCCAGTGAAAGCCTGCTTGGCGCCGCCTTGGCCGAACCGGACAACGCCGAACAAGCCTTGCGCGCCCAGGCCCGACGCCTGCAGGCCTGCGGTCTGCTGCCGCTAGCCGGTTTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5304596‑5304443‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcgTTGTCCGGTTCGGCCAAGGCGGCGCCAAGCAGGCTTTCACTGGCGCCGTAGCGTTGCAGGGTATCGAGGACGAAGGGCTCTTCGTCCGGGGTCGGCGCTTCCAGCGCCTCAAAGTACACCTTCAAGCGCTGGCTGAAGAAGTGC > NC_002947/5304517‑5304660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |