New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5740403	56 (0.950)	4 (0.070)	4/244	NT	7.5%	coding (1333/1365 nt)	hutF	formiminoglutamate deiminase
	?	NC_002947	= 5740534	46 (0.840)					coding (545/573 nt)	PP_5037	lipocalin family lipoprotein

GGCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5740248‑5740403 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcgtCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAG  <  NC_002947/5740534‑5740460                                                                                                                                                                                                                                         tGCAGGACCCCTACATCTCCATGGAGGAGGGTGATGCCATTCTCATCCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGG                                                                                     <  8:181495/147‑1   CAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCG                                                                                  >  3:335203/1‑149   CAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCG                                                                                  <  7:186460/149‑1         CCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGC                                                                                   >  1:255780/1‑142         CCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGC                                                                                   <  2:255780/142‑1                                                                     GATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGG                >  8:109326/1‑149                                                                                   CGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAG  <  7:109326/149‑1                                                                                                                       GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTT            <  7:139873/103‑1                                                                                                                       GGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTT            >  8:139873/1‑103                                                                                                                                                                                                                                         GGCAGGACCCCTACATCGCCATGGCGGAGGGTGATGCCATTCTCAACCGTTGGCTGTTTGCCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5740248‑5740403 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgggcgtCCGATCAGCAAATAGTAAAAATGCACTGAGTTTTTTGGGGTTGCGTTGCAACCCTTCGCGGGCTTGCACGCGAAG  <  NC_002947/5740534‑5740460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.