New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5811000	58 (0.980)	4 (0.070)	4/252	NT	6.9%	coding (328/2220 nt)	priA	primosome assembly protein
	?	NC_002947	= 5811050	52 (0.920)					coding (378/2220 nt)	priA	primosome assembly protein

CCCGCCGACAAACTGAAGCCTGCCAGCGCCCTGCTCGACCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5810850‑5811000 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGTAGTACTGGGCGGTCCACAGGCACAACTTGAACAGCGACGCGGG  <  NC_002947/5811050‑5810904                                                                                                                                                                                                                                                                                                            CCCTCCGACAAACTGCAGCCTGCCAGCGCCCTGCTCGTCCCGGTGTCCCCCATCCCCTCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGATCTGGGCGCTGCCCACGCTACTGC                                                                                                                                                        <  6:90048/148‑1                       CCAGCGCCCTGCTCGACCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGC                                                                                                                                                      >  1:279601/1‑128                       CCAGCGCCCTGCTCGACCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGC                                                                                                                                                      <  2:279601/128‑1                                                CCCCATCCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTC                                                                                                        >  4:53510/1‑149                                                              CGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTA                                                                                          <  3:53510/149‑1                                                               GCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAG                                                                                         <  2:50173/149‑1                                                                                  TGGACCGCCCAGCACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCA                                                                                 >  8:197847/1‑138                                                                                                                                                     GCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGTAGTACTGGGCGGTCCACAGGCACAACTTGAACAGCGACGCGG   >  1:156970/1‑149                                                                                                                                                     GCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGTAGTACTGGGCGGTCCACAGGCACAACTTGAA              <  5:76567/138‑1                                                                                                                                                     GCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGTAGTACTGGGCGGTCCACAGGCACAACTTGAA              >  6:76567/1‑138                                                                                                                                                     GCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGT                                             <  7:23060/107‑1                                                                                                                                                     GCCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGT                                             >  8:23060/1‑107                                                                                                                                                      CCCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGTAGTACTGGGCGGTCCACAGGCACAACTTGAACAGCGACGCGGG  >  5:163735/1‑149                                                                                                                                                                                                                                                                                                            CCCGCCGACAAACTGAAGCCTGCCAGCGCCCTGCTCGACCCGGTGTCCCCCATCCCCGCGTCGCTGTTCAAGTTGTGCCTGTGGACCGCCCAGTACTACCAGCACAGCCTGGGCGATACCCTGAGCTGGGCGCTGCCCACGCTACTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5810850‑5811000 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccCGGGGCTATGTGCCAGAAGCGTTCCTGGCGCATTTCGGCGGCTTCGCCCTGGCGCAGTAGCGTGGGCAGCGCCCAGCTCAGGGTATCGCCCAGGCTGTGCTGGTAGTACTGGGCGGTCCACAGGCACAACTTGAACAGCGACGCGGG  <  NC_002947/5811050‑5810904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.