New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5915711 =	52 (0.880)	5 (0.090)	4/250	NT	9.4%	coding (1116/1143 nt)	argE	acetylornithine deacetylase
	?	NC_002947	5915748 =	47 (0.840)					coding (1079/1143 nt)	argE	acetylornithine deacetylase

AGCGGTGGCGTTCGGCACCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5915861‑5915711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgacATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAACGCCACCGCTTCAGCGCGATGGCCAGTCAGGCGCTCCGCGAC  >  NC_002947/5915748‑5915893                                                                                                                                                                                                                                                                                                           AGCGGTGGCGTTCGGCACCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGT                                                                                                                                                       <  4:188554/148‑1  GCGGTGGCGTTCGGCACCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGTATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGA                                                                                                                                                     <  1:272385/149‑1   CGGTGGCGTTCGGCACCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGAC                                                                                                                                                    <  7:161218/149‑1   CGGTGGCGTTCGGCACCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGAC                                                                                                                                                    <  6:9286/149‑1                  CCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGT                                                                                                                                                       <  7:119305/131‑1                           CTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTG                                                                                                                                                      <  8:280685/123‑1                           CTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTG                                                                                                                                                      >  7:280685/1‑123                                                                                                           CTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAA                                            >  1:46218/1‑149                                                                                                           CTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCG                                                    <  5:106527/141‑1                                                                                                           CTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCG                                                    >  6:106527/1‑141                                                                                                            TTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAAC                                           >  1:130485/1‑149                                                                                                                      ACGAATCGAGCCTACCGTGCGTCTATTGCGTGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAACGCCACCGCTT                                 <  2:46218/149‑1                                                                                                                                                    TGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAACGCCACCGCTTCAGCGCGATGGCCAGTCAGGCGCTCCGCGA   <  5:9286/149‑1                                                                                                                                                    TGACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAACGCCACCGCTTCAGCGCGATGGCCAGTCAGGCGCTCCGCGA   >  7:70876/1‑149                                                                                                                                                     GACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTG                                                 <  4:281080/102‑1                                                                                                                                                     GACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTG                                                 >  3:281080/1‑102                                                                                                                                                      ACATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAACGCCACCGCTTCAGCGCGATGGCCAGTCAGGCGCTCCGCGAC  <  8:161218/148‑1                                                                                                                                                                                                                                                                                                           AGCGGTGGCGTTCGGCACCGAAGCACCTTATCTTCAGCAACTGGGCTGCCAGACCATCGTGCTGGGCCCTGGCGACATTGCCTGTGCCCACCAGCCCGGCGAATACCTTGAAATGTCACGAATCGAGCCTACCGTGCGTCTATTGCGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5915861‑5915711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgacATTTCAAGGTATTCGCCGGGCTGGTGGGCACAGGCAATGTCGCCAGGGCCCAGCACGATGGTCTGGCAGCCCAGTTGCTGAAGATAAGGTGCTTCGGTGCCGAACGCCACCGCTTCAGCGCGATGGCCAGTCAGGCGCTCCGCGAC  >  NC_002947/5915748‑5915893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.