New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5977420 | 64 (1.090) | 4 (0.070) | 4/248 | NT | 5.5% | coding (1221/1491 nt) | yifB | ATP‑dependent chelatase |
? | NC_002947 | = 5977454 | 76 (1.360) | coding (1255/1491 nt) | yifB | ATP‑dependent chelatase |
TATCGCAACAAGCTGTCCGGGCCACTGCTGGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAGAGCACTACATTGAACAACCAGCCTTGTGGTGAAACCAGTGCCGATGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5977304‑5977420 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgccTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGCGGCGACATCGGCACTGGTTTCACCACAAGGCTGGTTGTTCAATGTAGTGCTCTCGCGAGCCACGGTCAGGTGCAGGTCGATGCGGTCCAGCAGTGGCCCGGACAGCTTGTTGC < NC_002947/5977454‑5977308 TATCGCAACAAGCTGTCCGGGCCACTGCTGGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAGAGCACTACATTGAACAACCAGCCTTGTGGTGAAACCAGTGCCGATGTCGCCTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTG > 4:223533/1‑149 TCGCAACAAGCTGTCCGGGCCACTGCTGGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAGAGCACTACATTGAACAACCAGCCTTGTGGTGAAACCAGTGCCGATGTCGCCTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGC > 7:31109/1‑149 AGCTGTCCGGGCCACTGCTGGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAGAGCACTACATTGAACAACCAGCCTTGTGGTGAAACCAGTGCCGATGTCGCCTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGCGGCGACAT < 8:31109/149‑1 CTGTCCGGGCCACTGCTGGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAGAGCACTACATTGAACAACCAGCCTTGTGGTGAAACCAGTGCCGATGTCGCCTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGCGGCGACATCG < 3:223533/149‑1 TCGCCTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGCGGCGACATCGGCACTGGTTTCACCACAAGGCTGGTTGTTCAATGTAGTGCTCTCGCGAGCCACGGTCAGGTGCAGGTCGATGCGGTCCAGCAGTGGCCCGGACAGCTTGT > 5:152512/1‑149 GCCTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGCGGCGACATCGGCACTGGTTTCACCACAAGGCTGGTTGTTCAATGTAGTGCTCTCGCGAGCCACGGTCAGGTGCAGGTCGATGCGGTCCAGCAGTGGCCCGGACAGCTTGTTG < 6:4585/149‑1 CTGTGCTGCAGCTCCCGCGCTTCAGCCCCCCTGGCGGCGACATCGGCACTGGTTTCACCACAAGGCTGGTTGTTCAATGTAGTGGTCTCGCGAGCCACGGTCAGGTGCAGGTCGATGCGGTCCAGCAGTAGCCCGGACAGCTTGTTGC > 8:76238/1‑148 TATCGCAACAAGCTGTCCGGGCCACTGCTGGACCGCATCGACCTGCACCTGACCGTGGCTCGCGAGAGCACTACATTGAACAACCAGCCTTGTGGTGAAACCAGTGCCGATGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5977304‑5977420 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgccTGTGCTGCAGCTCCCGCGCTTCAGCCACCCTGGCGGCGACATCGGCACTGGTTTCACCACAAGGCTGGTTGTTCAATGTAGTGCTCTCGCGAGCCACGGTCAGGTGCAGGTCGATGCGGTCCAGCAGTGGCCCGGACAGCTTGTTGC < NC_002947/5977454‑5977308 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |