New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1036521 =70 (1.190)4 (0.070) 4/244 NT 5.9% coding (226/591 nt) PP_0895 hypothetical protein
?NC_002947 1036566 = 62 (1.130)coding (271/591 nt) PP_0895 hypothetical protein

CCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACA  >  NC_002947/1036373‑1036666
                                                                                                                                                    |                                                                                                                                                 
gtcgctcgaccgcgcagaacgcgcagtaatcgaactcggccagtttgtgtgcgtaggactcgcgctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcaccgaagtagtacacactggccggg                                                                                                                                                   <  8:330354‑M1/1‑1 (MQ=255)
 cgcgAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGt                                                                                                                                                  <  4:275818/149‑1 (MQ=255)
  gcgAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTc                                                                                                                                                 >  3:342821/1‑149 (MQ=255)
  gcgAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTc                                                                                                                                                 <  3:5815/149‑1 (MQ=255)
   gctcgaccgcgcagaacgcgcagtactcgaactcggccagtttgtgtgcgtaggactcgcgctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagctactcaccgaagtagtacacattggccggGTc                                                                                                                                                 >  2:342442‑M1/146‑148 (MQ=255)
     tcgaccgcgcagaacgcgcagtaatcgaactcggccagtttgtgtgcgtaggactcgcgctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgcctcaccgaagtagtacacactggccggGTcgcg                                                                                                                                              <  5:191395‑M1/6‑1 (MQ=255)
         ccccTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGccc                                                                                                                                           <  4:250156/148‑1 (MQ=255)
          cccTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGcccct                                                                                                                                         >  2:83557/1‑147 (MQ=255)
            cTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAAt                                                                                                                                       >  6:272689/1‑149 (MQ=255)
              aCCTTTACGACGGCATCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTc                                                                                                                                     >  8:29433/1‑149 (MQ=255)
              aCCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGAGCAGCCTGGTAGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCAGCTGGTGGATGTCGCGCCCGAAtt                                                                                                                                      >  5:71197/1‑148 (MQ=255)
                cTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCca                                                                                                                                   <  5:57349/149‑1 (MQ=255)
                 tttACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCcag                                                                                                                                  >  2:340676/1‑149 (MQ=255)
                    gcgcagtaatcgaactcggccagtttgtgtgcgtaggactcgcgctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcaccgaagtagtacacactggccggGTCgcgc                                                                                                                                             <  8:134327‑M1/7‑1 (MQ=255)
                    gcgcagtaatcgaactcggccagtttgtgtgcgtaggactcgcgctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcaccgaagtagtacacactggccggGTCgcgc                                                                                                                                             >  7:134327‑M1/129‑135 (MQ=255)
                    acgacgGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGTTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCcagca                                                                                                                                <  8:319493/148‑1 (MQ=255)
                     cgacgGCACACCGGAGGACGAGGACGACTACCTGGCCAACTTTGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCGTGACTCCGGGAAGGGGGGCGGCGCCTCTACCTGCCTGCCGCTTGGGGATGGCGCGCCCGAATTACagcagc                                                                                                                              <  2:370147/149‑1 (MQ=255)
                      gacgGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCagcagc                                                                                                                              >  4:276396/1‑148 (MQ=255)
                      gacgGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCagcagc                                                                                                                              >  3:235320/1‑148 (MQ=255)
                      gacgGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCagcagc                                                                                                                              >  5:40036/1‑148 (MQ=255)
                              cccGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTgg                                                                                                                     <  5:272689/149‑1 (MQ=255)
                              cccGGAGTACAAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTgg                                                                                                                     >  1:170273/1‑149 (MQ=255)
                                       cGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAgggg                                                                                                             <  3:276396/148‑1 (MQ=255)
                                       cGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGGGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGgc                                                                                                            <  7:172644/149‑1 (MQ=255)
                                          ggCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACTGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGgcgt                                                                                                          >  2:20285/1‑147 (MQ=255)
                                           tttgtgtgcgtaggactcgcgctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcacctaagtagtacacactggccggGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGa                                                                                                        >  3:323842‑M1/106‑149 (MQ=255)
                                              gACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGAccc                                                                                                     >  5:35809/1‑149 (MQ=255)
                                                   ccTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGGTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCa                                                                                                <  6:20204/149‑1 (MQ=255)
                                                   ccTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAggg                                                                                                              <  5:266486/135‑1 (MQ=255)
                                                   ccTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAggg                                                                                                              >  6:266486/1‑135 (MQ=255)
                                                   ccTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGc                                                                                                  <  1:340676/147‑1 (MQ=255)
                                                   ccTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGGCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGc                                                                                                  <  2:152738/147‑1 (MQ=255)
                                                     tGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAgt                                                                                              >  5:320100/1‑149 (MQ=255)
                                                       gCCAAGTATGCCCGCCCCGGGCGCAGCCTGGTTGTCCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCGTGCCGCTGGTGGATGTCGCGCCGGAATTCCAGCAGCCATTCCTGGCCCAGGCGCGCGACCCGGCCAgtgt                                                                                            <  8:110318/149‑1 (MQ=255)
                                                         cAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAgtgtg                                                                                           >  7:266636/1‑148 (MQ=255)
                                                          aaCTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGta                                                                                         >  4:35112/1‑149 (MQ=255)
                                                            cTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGAAGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCAAGTGTGtac                                                                                        >  7:54638/1‑148 (MQ=255)
                                                             tATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGtacta                                                                                      >  7:228170/1‑149 (MQ=255)
                                                             tATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTACTGGCCCAGGGGCGCGACCCGGCCAGTGTGtact                                                                                       >  7:145115/1‑148 (MQ=255)
                                                                ctcgatgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcaccgaagtagtacacactggccggGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCg                                                                                                    >  4:104768‑M1/85‑132 (MQ=255)
                                                                 cccGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTc                                                                                  >  1:333357/1‑149 (MQ=255)
                                                                    gCTCCGGGCGCAGCCTGGTTTTGCTGGCGTTGGTCGACGCCAAGGTGGTCGGCGCCTCTACCGTCTTGCCGCTGGTGTTTGTCGCTCCCTATTTCCTGCAGTTATTCTTGGTTTTGGGTTGTGATCCGGTCAGTGTGTACTACTTCGGt                                                                               <  8:54638/149‑1 (MQ=255)
                                                                    gCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTACTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGt                                                                               <  8:145115/149‑1 (MQ=255)
                                                                     tgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcaccgaagtagtacacactggccggGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGAc                                                                                                       <  5:268022‑M1/45‑1 (MQ=255)
                                                                     tgaagaagcgaacccccaggccctgtccgcggtatgccggcaacaccagcgactcaccgaagtagtacacactggccggGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGAc                                                                                                       >  6:268022‑M1/80‑124 (MQ=255)
                                                                      gccGGGCGCAGCGGGGTTGGGCGGGGGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCTGCTGGTTTATGCCGCGCCCTAATTCCAGCAGCCATTCTTGGCCTAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGa                                                                             <  8:231949/148‑1 (MQ=255)
                                                                        cGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGaa                                                                                                                                        <  2:356475/88‑1 (MQ=255)
                                                                        cGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGaa                                                                                                                                        >  1:356475/1‑88 (MQ=255)
                                                                        cGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAg                                                                            <  4:342821/148‑1 (MQ=255)
                                                                                 ccTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGgc                                                                                                            <  3:64441/107‑1 (MQ=255)
                                                                                 ccTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGgc                                                                                                            >  4:64441/1‑107 (MQ=255)
                                                                                    ggTTGTGCTGGCGCTGGACGACGGAAAGGTGGGCGGCGCCTATACCGGCCTGCCGCGGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGCCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGc                                                               <  6:40036/149‑1 (MQ=255)
                                                                                     gTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGc                                                               <  8:266636/148‑1 (MQ=255)
                                                                                     gTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGc                                                               <  3:35112/148‑1 (MQ=255)
                                                                                      ttGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCTCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGACCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGAGAGTCGATGGTGTTGCCg                                                             >  2:327765/1‑149 (MQ=255)
                                                                                        gtgCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCgg                                                            <  4:235320/148‑1 (MQ=255)
                                                                                        gtgCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCgg                                                            >  6:191395/1‑148 (MQ=255)
                                                                                              gcgcTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAgtgtgt                                                                                          >  7:201328/1‑112 (MQ=255)
                                                                                              gcgcTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAgtgtgt                                                                                          <  8:201328/112‑1 (MQ=255)
                                                                                              gcgcTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTAGGTGAGTCGCTGGTGTTGCCGGCATACcg                                                     >  3:362505/1‑149 (MQ=255)
                                                                                               cgcTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACcgc                                                    <  8:228170/149‑1 (MQ=255)
                                                                                                gcTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACcgtg                                                   >  3:180131/1‑147 (MQ=255)
                                                                                                    gacgacGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGa                                                 <  5:50013/147‑1 (MQ=255)
                                                                                                     acgacgGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGTGGACAg                                              <  4:180131/149‑1 (MQ=255)
                                                                                                          ggCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCt                                         >  5:243597/1‑149 (MQ=255)
                                                                                                            cAAGTTGGTCGGCGCCTCTACCGGCCTGCGGCTGGTTGATGTCGCGCCCTAATTCCAGCAGCCATTCCTGGCCAAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgg                                       <  6:320100/149‑1 (MQ=255)
                                                                                                            cAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgg                                       <  2:170273/149‑1 (MQ=255)
                                                                                                              aGGTGGTCGGCGCCTGTACCGGCCTGCGGCTGGGGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgggg                                     <  2:333357/149‑1 (MQ=255)
                                                                                                                     cGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGct                              >  4:56734/1‑149 (MQ=255)
                                                                                                                       gcgcCTCTACTGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGTGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGcttc                            <  1:20285/149‑1 (MQ=255)
                                                                                                                           ctctACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgg                                       >  3:261939/1‑134 (MQ=255)
                                                                                                                           ctctACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgg                                       <  4:261939/134‑1 (MQ=255)
                                                                                                                           ctctACCGGCCTGCCGCTGGTGGATGTCCCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCa                        >  1:210740/1‑149 (MQ=255)
                                                                                                                            tctACCGGCCTGCCGCTGGTGGATGCCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCa                        >  2:368095/1‑148 (MQ=255)
                                                                                                                                ccGGCCTGCGGCTGGTGGAGGGCGCGCCCTATTTCCACCAGCCTTTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATc                      <  6:243597/146‑1 (MQ=255)
                                                                                                                                ccGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGcttctt                          <  3:312372/142‑1 (MQ=255)
                                                                                                                                ccGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGcttctt                          >  4:312372/1‑142 (MQ=255)
                                                                                                                                ccGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAg                   >  8:222679/1‑149 (MQ=255)
                                                                                                                                   gCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAgcgc                <  6:266163/149‑1 (MQ=255)
                                                                                                                                     cTGCCGCTGGTGGTTGTCGCGCCCTATTTCCAGCAGCCATTCCTGGCCCAGTGGCGGGACCCGGCCAGTGTGTACTACTTCTGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGa              <  1:327765/149‑1 (MQ=255)
                                                                                                                                        ccGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTc           >  5:307967/1‑149 (MQ=255)
                                                                                                                                         cGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTGCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCGTCATCGAGCGCGAGTcc          >  8:269513/1‑149 (MQ=255)
                                                                                                                                               tggATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGca    <  3:56734/149‑1 (MQ=255)
                                                                                                                                               tggATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGca    <  7:29433/149‑1 (MQ=255)
                                                                                                                                                ggATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGcttct                           <  3:96303/125‑1 (MQ=255)
                                                                                                                                                ggATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGcttct                           >  4:96303/1‑125 (MQ=255)
                                                                                                                                                 gATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGcaca  >  7:330354/1‑149 (MQ=255)
                                                                                                                                                 gATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGcaca  >  3:247179/1‑149 (MQ=255)
                                                                                                                                                 gATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGcaca  >  7:167575/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
CCGCGAGTTCCCCTACCTTTACGACGGCACCCCGGAGTACGAGGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACA  >  NC_002947/1036373‑1036666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.