BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1844137	0 (0.000)	42 (0.740)	39/254	NT	56.8%	coding (657/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	2177702 =	64 (1.120)	42 (0.740)	39/254	NT	56.8%	intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein

Only 100 of 122 total aligned reads displayed.

TCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTGGTGAAC  >  NC_002947/1843989‑1844284

ccaaaagacctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTc                                                                                                                                                     <  7:198661‑M1/4‑1 (MQ=255)

ccaaaagacctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTc                                                                                                                                                     <  6:320197‑M1/4‑1 (MQ=255)

 caaaagacctctagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgctcccttcaacgcatttcgcgtgttttcacacagcctgGGTCg                                                                                                                                                    >  2:10610‑M1/145‑149 (MQ=255)

  aaaagacctcaagaacgactcacatcgccacatgcgccccaccacggcgaattgagctaaaccacgcaatttctagccagattggcaaccctctctagatccctgcgcccatcaacgcatttcgcgtgatttcacacagcctgGGTCgg                                                                                                                                                   <  6:33381‑M1/6‑1 (MQ=255)

        cctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatcgctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCg                                                                                                                                             <  1:95232‑M1/12‑1 (MQ=255)

        cctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCg                                                                                                                                             <  4:142010‑M1/12‑1 (MQ=255)

         cGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtg                                                                                                                                            >  1:320520‑M1/1‑140 (MQ=255)

         cGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgt                                                                                                                                             <  2:71233‑M1/148‑9 (MQ=255)

         cGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGACGTGGGCCAGTTCGTCCAGCTCATGGCTACCCATGGTCcagactgt                                                                                                                                             <  4:188144‑M1/148‑9 (MQ=255)

          tcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGtt                                                                                                                                           <  6:105286‑M1/14‑1 (MQ=255)

          tcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGt                                                                                                                                            <  4:207429‑M1/13‑1 (MQ=255)

            aagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGttct                                                                                                                                         <  3:231747‑M1/16‑1 (MQ=255)

                acgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGa                                                                                                                                     >  4:76343‑M1/130‑149 (MQ=255)

                 cgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAg                                                                                                                                    >  5:368424‑M1/129‑149 (MQ=255)

                 cgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAg                                                                                                                                    >  6:242821‑M1/129‑149 (MQ=255)

                   actcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGt                                                                                                                                  <  7:339445‑M1/23‑1 (MQ=255)

                     tcacatcgccacatgcgccccagcacggggatttgagataaaccacgcaatttcttgccagtttggcaagcctctctagatcgctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTgg                                                                                                                                <  2:196524‑M1/25‑1 (MQ=255)

                     tcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTgg                                                                                                                                >  3:274212‑M1/125‑149 (MQ=255)

                     tcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTgg                                                                                                                                <  1:113113‑M1/25‑1 (MQ=255)

                         cTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcgg                                                                                                                             <  3:162479‑M1/148‑25 (MQ=255)

                            gcgcACGTCATCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTATTCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggtt                                                                                                                           <  7:327769‑M1/147‑27 (MQ=255)

                               acatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGa                                                                                                                      >  8:198661‑M1/115‑149 (MQ=255)

                                 atgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatcgctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGc                                                                                                                    >  2:95232‑M1/113‑149 (MQ=255)

                                     gccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGAt                                                                                                                <  2:261388‑M1/41‑1 (MQ=255)

                                       cccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGAtt                                                                                                               <  6:317942‑M1/42‑1 (MQ=255)

                                        ccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcatctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGa                                                                                                             <  6:279741‑M1/44‑1 (MQ=255)

                                         cagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCtt                                                                                                                        <  7:114434‑M1/33‑1 (MQ=255)

                                         cagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCtt                                                                                                                        >  8:114434‑M1/105‑137 (MQ=255)

                                              cTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcg                                                                                                       >  7:50007‑M1/1‑103 (MQ=255)

                                                 gTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTATGCAGGGTTTCGGCCATGCGTTTGATCCCGTGGGCCAGTTCGTCAAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtgtaaccttctggtcgtcgtgc                                                                                                    >  8:22162‑M1/1‑100 (MQ=255)

                                                 cgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCt                                                                                                    <  7:248839‑M1/53‑1 (MQ=255)

                                                  gatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCtt                                                                                                   >  7:82307‑M1/96‑149 (MQ=255)

                                                  gatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCACGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCtt                                                                                                   >  1:261388‑M1/96‑149 (MQ=255)

                                                    tttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGa                                                                                                 <  5:365813‑M1/56‑1 (MQ=255)

                                                    tttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGa                                                                                                 >  4:231747‑M1/94‑149 (MQ=255)

                                                      tgatctaaaccacgcaatttctttccagtttggcaagcctctcaagataccttctcccttcaacgcatttcgcgtgttttcacacagcctgGGTCTGCAGGCGTTCTTCGAGGTGGCCGTACTTGAGCTGATTGACCGCGTGCttgtt                                                                                                >  2:82780‑M1/92‑146 (MQ=255)

                                                        cTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggg                                                                                             <  2:320520‑M1/149‑57 (MQ=255)

                                                        cTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtgg                                                                                              <  6:207296‑M1/148‑56 (MQ=255)

                                                          gtgtTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCCGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGCTCcagactgtgtgaaaatgcccgcggttgtctaaccttcaggtcgtcgtgaccgagggga                                                                                           >  1:108697‑M1/1‑91 (MQ=255)

                                                             ttGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagcctgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaa                                                                                        >  4:365952‑M1/1‑88 (MQ=255)

                                                             ttGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaa                                                                                        >  5:227977‑M1/1‑88 (MQ=255)

                                                             aaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTc                                                                                          >  2:182452‑M1/85‑147 (MQ=255)

                                                             aaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGa                                                                                        <  6:335202‑M1/65‑1 (MQ=255)

                                                              accacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGGCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGAt                                                                                       >  4:106779‑M1/84‑149 (MQ=255)

                                                               ccaagcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacaggcttGGTCGGCAGGCGTTGTTCGAGGTGGCCGTACTTGAGCTGATTGAGCGCGTGCTTGATGCGTTCGATg                                                                                      >  5:33381‑M1/83‑149 (MQ=255)

                                                                cAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatca                                                                                     >  3:173228‑M1/1‑85 (MQ=255)

                                                                cAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatc                                                                                      <  4:278798‑M1/148‑64 (MQ=255)

                                                                  gTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgt                                                                                                      >  3:146584‑M1/1‑83 (MQ=255)

                                                                      atttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGt                                                                               >  8:339445‑M1/76‑149 (MQ=255)

                                                                      atttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGt                                                                               >  3:207429‑M1/76‑149 (MQ=255)

                                                                         gcttgccaaactggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCCTGATGCGTTCGATGGGGTCGTTGa                                                                            <  1:287538‑M1/77‑1 (MQ=255)

                                                                           ttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCATGATGCGTTCGATGGGGTCGTTGATg                                                                          <  6:169382‑M1/79‑1 (MQ=255)

                                                                           gggCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattc                                                                          <  3:320110‑M1/149‑76 (MQ=255)

                                                                            ggCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattc                                                                          <  7:106563‑M1/148‑76 (MQ=255)

                                                                                 tCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcg                                                                      >  6:248207‑M1/1‑68 (MQ=255)

                                                                                 gtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGTGTTCGATGGGGGCGTTGATGGTGCgg                                                                    >  1:196524‑M1/65‑149 (MQ=255)

                                                                                      aGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggt                                                                 >  5:308513‑M1/1‑63 (MQ=255)

                                                                                        aagcctctctagatccctgcgccctccaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATgc                                                             <  1:258337‑M1/92‑1 (MQ=255)

                                                                                          gcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATgcgc                                                           >  8:248839‑M1/56‑149 (MQ=255)

                                                                                            tCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctc                                                          <  8:50007‑M1/148‑92 (MQ=255)

                                                                                             tctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAgc                                                        <  1:167933‑M1/97‑1 (MQ=255)

                                                                                               tctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAgcgc                                                      <  2:2887‑M1/99‑1 (MQ=255)

                                                                                               gCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaac                                                      >  6:314366‑M1/1‑54 (MQ=255)

                                                                                                ccATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacg                                                     >  1:365636‑M1/1‑53 (MQ=255)

                                                                                                  aTGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgca                                                   <  6:227977‑M1/149‑99 (MQ=255)

                                                                                                   tGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcag                                                  <  5:248207‑M1/149‑100 (MQ=255)

                                                                                                   gatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCaa                                                   <  6:111348‑M1/102‑1 (MQ=255)

                                                                                                       cctgcgcccttcaacgcatttcgcgtgttttcacacagcctcGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGc                                              >  5:317942‑M1/43‑149 (MQ=255)

                                                                                                        ctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGcc                                             <  4:128028‑M1/108‑1 (MQ=255)

                                                                                                         tGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgaggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttaca                                            >  3:129885‑M1/1‑44 (MQ=255)

                                                                                                          gATGCCGTGGTCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttaca                                            <  5:314366‑M1/148‑106 (MQ=255)

                                                                                                             cccttcaacgcatttcgcgtggtttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGa                                        >  2:118516‑M1/37‑149 (MQ=255)

                                                                                                              ccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAg                                       >  6:72871‑M1/36‑149 (MQ=255)

                                                                                                              ccGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTAcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgct                                       <  5:178670‑M1/149‑111 (MQ=255)

                                                                                                               cttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGa                                                                            >  5:266578‑M1/35‑111 (MQ=255)

                                                                                                               cttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGa                                                                            <  6:266578‑M1/77‑1 (MQ=255)

                                                                                                                 tcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATg                                                                                               <  1:275622‑M1/58‑1 (MQ=255)

                                                                                                                 tcaacgcatatcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATg                                                                                               >  2:275622‑M1/33‑90 (MQ=255)

                                                                                                                   aacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCCTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCca                                  >  2:287538‑M1/31‑149 (MQ=255)

                                                                                                                    acgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCcag                                 >  2:167933‑M1/30‑149 (MQ=255)

                                                                                                                     ccAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggag                                <  3:278559‑M1/149‑118 (MQ=255)

                                                                                                                        gTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgc                             >  4:61727‑M1/1‑29 (MQ=255)

                                                                                                                        gTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgc                             <  7:280652‑M1/149‑121 (MQ=255)

                                                                                                                         tttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCcaggcagg                            >  6:365813‑M1/25‑149 (MQ=255)

                                                                                                                             tCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctgga                        <  2:365636‑M1/149‑126 (MQ=255)

                                                                                                                             gcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGa                         >  5:335202‑M1/21‑148 (MQ=255)

                                                                                                                                aGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacga                     >  1:137720‑M1/1‑21 (MQ=255)

                                                                                                                                     ctgGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctgggcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactac                 <  1:98401‑M1/147‑133 (MQ=255)

                                                                                                                                     aTGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattgatcgaaggtgaggctcgaacgcaggttaccttgctgccggagtgcctggacgactacg                >  8:315432‑M1/1‑16 (MQ=255)

                                                                                                                                      tGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgt               <  4:173228‑M1/149‑135 (MQ=255)

                                                                                                                                       acacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCaa               <  8:210651‑M1/138‑1 (MQ=255)

                                                                                                                                       acacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCaa               <  5:167937‑M1/138‑1 (MQ=255)

                                                                                                                                         cTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaa                                                                                        <  8:343112‑M1/73‑62 (MQ=255)

                                                                                                                                            cccATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgacagtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgtcaccga         >  5:174453‑M1/1‑9 (MQ=255)

                                                                                                                                              cATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgtcaccgat        >  4:160738‑M1/1‑7 (MQ=255)

                                                                                                                                               aTGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgtcaccgatg       >  2:158414‑M1/1‑6 (MQ=255)

                                                                                                                                                 ggTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgtcaccgatgaa     >  7:63560‑M1/1‑4 (MQ=255)

                                                                                                                                                 GGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTGGt      >  5:169382‑M1/1‑147 (MQ=255)

                                                                                                                                                   tCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgtcaccgatgaaaac  >  4:100058‑M1/1‑2 (MQ=255)

                                                                                                                                                   tCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacgtcaccgatgaaaac  >  7:58534‑M1/1‑2 (MQ=255)

TCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTGGTGAAC  >  NC_002947/1843989‑1844284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.