New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2007976 = | 54 (0.920) | 4 (0.070) | 4/248 | NT | 7.1% | coding (987/1605 nt) | PP_1791 | aldolase/synthase |
? | NC_002947 | 2008015 = | 53 (0.950) | coding (948/1605 nt) | PP_1791 | aldolase/synthase |
ACCGGTTTATGCTGGCGAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGTGGATACCATATTTGCCA > NC_002947/2007830‑2008117 | aagttatttatggctgggggacaacccagtattactacctcgctggcaaatttgttatccacccaacctatattcaagaaatgctgggtgactcccgcttcggcgaagaagatattcttgcggtctttgaataccttcgcaatgaaggc > 8:120066‑M1/147‑149 (MQ=255) aagttaagtatggctgggggaccaacccgtattactacctcgctggcaaatatggtatccacccaacctatattcaagaaatgctgggtgactcccgcttcggcgaagaagatattcttgcggtcattgaataccttcgcaatgaaggc > 7:110282‑M1/147‑149 (MQ=255) aCCGGTTTATGCTGGCGAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGggc > 1:228528/1‑149 (MQ=255) aTGCTGGCGAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATc > 2:308905/1‑147 (MQ=255) cTGGCGAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGc < 7:295676/148‑1 (MQ=255) cTGGCGAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCg > 4:113462/1‑149 (MQ=255) gAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATg > 5:29878/1‑148 (MQ=255) aTGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGGAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTAc < 4:47636/149‑1 (MQ=255) tGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACg > 6:137951/1‑149 (MQ=255) ccaacccgtattactacctcgctggcaaatatggtatccacccaacctatattcaagaaatgctgggtgactcccgcttcggcgaagaagatattcttgcggtcattgaataccttcgcaatgaaGGCGGCATCAAGCGTATGTACGCt < 1:59528‑M1/24‑1 (MQ=255) ccAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAActtc > 7:326162/1‑149 (MQ=255) ccAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAActt < 3:113462/148‑1 (MQ=255) cAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAActtct > 4:147694/1‑149 (MQ=255) cAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAActtct > 3:181638/1‑149 (MQ=255) gCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCTGCATCAAGCGTATGTACGCTGAACTTCTTgcc > 6:262798/1‑149 (MQ=255) ggTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCGCTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCa > 1:150468/1‑149 (MQ=255) gctggcaaatatggtatccacccaacctatattcaagaaatgctgggtgactcccgcttcggcgaagaagatattcttgcggtcattgaataccttcgcaatgaaGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCAt > 2:59528‑M1/106‑149 (MQ=255) gTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCAt > 6:328741/1‑149 (MQ=255) tGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCAtt < 5:135311/149‑1 (MQ=255) tGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGACACTGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCAtt < 5:256571/149‑1 (MQ=255) gcTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAg < 3:147694/149‑1 (MQ=255) gcTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTAAGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAg > 4:222029/1‑149 (MQ=255) gCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTAtt < 5:328741/149‑1 (MQ=255) tatccacccaacctatattcaagaaatgctgggtgactcccgcttcggcgaagaagatattcttgcggtcattgaataccttcgcaatgaaGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCt > 6:89823‑M1/92‑131 (MQ=255) tatccacccaacctatattcaagaaatgctgggtgactcccgcttcggcgaagaagatattcttgcggtcattgaataccttcgcaatgaaGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCt < 5:89823‑M1/40‑1 (MQ=255) aGGACCAGTACCTAGAAGCAATACATGTTGGCCGGCAAGAAGATCCTGCGGTGACCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCGTTGCGAAGGTATTCaa > 2:172549/1‑149 (MQ=255) aGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCaa < 4:181638/149‑1 (MQ=255) cAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGAcc > 1:366516/1‑149 (MQ=255) cAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGAcc > 4:39125/1‑149 (MQ=255) aGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCg < 1:308905/149‑1 (MQ=255) gTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCg > 6:366336/1‑148 (MQ=255) cTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCaa < 6:104493/90‑1 (MQ=255) cTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCaa > 5:104493/1‑90 (MQ=255) cTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAg > 7:170810/1‑148 (MQ=255) tAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGaa < 5:214446/149‑1 (MQ=255) aGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTTAATGACCGCAAGAATAtc < 7:229383/149‑1 (MQ=255) gCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTAtt > 7:80017/1‑129 (MQ=255) gCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTAtt < 8:80017/129‑1 (MQ=255) cAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATAtctt > 5:291974/1‑149 (MQ=255) aTACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATAtcttct > 3:94447/1‑149 (MQ=255) aTCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGc > 3:67899/1‑149 (MQ=255) gCAAGAAGATCCTGCGGTGCCCGCTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGa < 2:150468/149‑1 (MQ=255) gCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGa < 2:366516/149‑1 (MQ=255) cAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAg < 2:228528/149‑1 (MQ=255) aagaagATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGt < 5:318544/149‑1 (MQ=255) gaagaTCCTGCGGTGCCCACTGACCTGTGGCCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCa > 1:31506/1‑149 (MQ=255) gaTCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCAcc > 5:250495/1‑148 (MQ=255) tCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGTCGACATCAAGCGTATGTACGCTGAACTTCTTGACGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTGCTTCGCCGAAGCGGGCGTCACCCAg > 8:331682/1‑149 (MQ=255) aCTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAata > 5:106465/1‑149 (MQ=255) aCTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCCGGAGTCACCCAGCATTTCTTGAata > 4:132254/1‑149 (MQ=255) aCCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAg > 1:160914/1‑118 (MQ=255) aCCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAg < 2:160914/118‑1 (MQ=255) cTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCa > 2:199306/1‑129 (MQ=255) cTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCa < 1:199306/129‑1 (MQ=255) cTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGtt > 4:308125/1‑149 (MQ=255) ggCGCTCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGt < 3:39125/148‑1 (MQ=255) ggCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGt < 2:31506/148‑1 (MQ=255) gcgcgcCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGTg > 2:50486/1‑148 (MQ=255) gcgcCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAATGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGTGGAt < 5:262798/149‑1 (MQ=255) aaaaGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGTGGATACCATATTTg > 8:138286/1‑149 (MQ=255) aGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGTGGATACCATATTTGCCa < 6:29878/149‑1 (MQ=255) | ACCGGTTTATGCTGGCGAATGAAGTGTTCCAATGCTTGCCGGTGCGCCGCTACGCCAGGACCAGTACCTAGAAGCAATACATCTTGGCCGGCAAGAAGATCCTGCGGTGCCCACTGACCTGTGGGCGCGCCACGGTAAAAGTGTCGGGCGGCATCAAGCGTATGTACGCTGAACTTCTTGCCGCCTTCATTGCGAAGGTATTCAATGACCGCAAGAATATCTTCTTCGCCGAAGCGGGAGTCACCCAGCATTTCTTGAATATAGGTTGGGTGGATACCATATTTGCCA > NC_002947/2007830‑2008117 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |