New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2780527 =	46 (0.780)	3 (0.050)	3/254	NT	6.3%	coding (301/480 nt)	PP_2433	hypothetical protein
	?	NC_002947	2780572 =	45 (0.790)					coding (346/480 nt)	PP_2433	hypothetical protein

GCCGCCACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAG  >  NC_002947/2780380‑2780668                                                                                                                                                    |                                                                                                                                                gccgccACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCgg                                                                                                                                                 <  7:73114/148‑1 (MQ=255)   cgccACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGcc                                                                                                                                               >  8:107819/1‑148 (MQ=255)    gccacaaaatcacaggccatagccctcggcaatctgcagcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGccc                                                                                                                                              >  3:323154‑M1/145‑148 (MQ=255)      cACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCcaca                                                                                                                                           >  6:329327/1‑149 (MQ=255)       acaaaatcacaggccatagccctcggcaatctgcagcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCcaca                                                                                                                                           <  7:32363‑M1/7‑1 (MQ=255)                    aGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGcc                                                                                                                             <  5:348504/149‑1 (MQ=255)                      cTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCTCTCGGCCCACATACCCGCAATGGCCGa                                                                                                                           >  6:265603/1‑149 (MQ=255)                         aCCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAgg                                                                                                                         <  5:329327/148‑1 (MQ=255)                           cGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCg                                                                                                                      >  7:303986/1‑149 (MQ=255)                            gAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGc                                                                                                                                                <  1:37683/122‑1 (MQ=255)                            gAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGc                                                                                                                                                >  2:37683/1‑122 (MQ=255)                               cgcgGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGtt                                                                                                                  <  5:327736/149‑1 (MQ=255)                                   gtgtGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTCTCGAGCGTGACCAACCGCTGACCGGGGCTGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGGTCGGt                                                                                                              <  5:265603/149‑1 (MQ=255)                                         tCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCg                                                                                                        >  4:173896/1‑149 (MQ=255)                                         tCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCg                                                                                                        >  5:22702/1‑149 (MQ=255)                                          gcagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCgg                                                                                                       >  4:189107‑M1/107‑149 (MQ=255)                                           cagcatttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCggg                                                                                                      >  8:32363‑M1/106‑149 (MQ=255)                                           aCGCCGGGGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCggg                                                                                                      <  5:270500/149‑1 (MQ=255)                                            cGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGc                                                                                                     <  5:169121/149‑1 (MQ=255)                                              catttcttcgacctgcgtggtgccttgctgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCaa                                                                                                   >  6:326985‑M1/103‑149 (MQ=255)                                                   ggAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCCGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGc                                                                                                     >  3:74776/1‑142 (MQ=255)                                                   ggAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCCGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGc                                                                                                     <  4:74776/142‑1 (MQ=255)                                                      gcgcGACCAGATCATCCCGCTGCGCACCCTNAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAAc                                                                                           >  1:34871/1‑149 (MQ=255)                                                         ctaCCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCTAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCt                                                                                        <  6:260045/147‑1 (MQ=255)                                                         cgACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCt                                                                                        >  5:69003/1‑149 (MQ=255)                                                          gACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTg                                                                                       <  3:173896/149‑1 (MQ=255)                                                               gATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑ttt                                                                                >  3:150214/1‑149 (MQ=255)                                                                  catcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTcc                                                                              >  2:290262/1‑148 (MQ=255)                                                                   atcCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCaa                                                                            <  7:107819/149‑1 (MQ=255)                                                                       cGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGccc                                                                        <  2:34871/149‑1 (MQ=255)                                                                            cgcACCCTCAAATCCCGTATCGAGCTTGACCTACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCGACATCACCGCCATGGCCGAGGCCGTGTTCGTTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAgg                                                                    <  1:355499/148‑1 (MQ=255)                                                                                 ccTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCt                                                              >  7:10408/1‑149 (MQ=255)                                                                                 ccTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCAGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCt                                                              >  6:276685/1‑149 (MQ=255)                                                                                     aaaTCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTtc                                                            <  4:341943/147‑1 (MQ=255)                                                                                       aTCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCgg                                                        <  8:303986/149‑1 (MQ=255)                                                                                             tATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGT‑C‑TTTACAAGCCCAAGGAACGCTTCTCGGGGCTGa                                                  <  1:133190/149‑1 (MQ=255)                                                                                                cGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGc                                               >  3:223300/1‑149 (MQ=255)                                                                                                    cGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGAt                                           <  1:85096/149‑1 (MQ=255)                                                                                                      tGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGaa                                                                                                           >  8:221387/1‑85 (MQ=255)                                                                                                      tGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGaa                                                                                                           <  7:221387/85‑1 (MQ=255)                                                                                                          cAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGAt                                     >  3:295044/1‑149 (MQ=255)                                                                                                          cAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGAt                                     >  5:127007/1‑149 (MQ=255)                                                                                                                 tGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTcac                               >  4:157492/1‑148 (MQ=255)                                                                                                                   aCCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTcacc                              <  3:157492/147‑1 (MQ=255)                                                                                                                      gTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCa                         <  4:223300/149‑1 (MQ=255)                                                                                                                          aTGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGTCTTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGc                       <  1:290262/149‑1 (MQ=255)                                                                                                                           tGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGCACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAg                    >  6:60956/1‑149 (MQ=255)                                                                                                                                  gATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGcaccac             >  1:218869/1‑149 (MQ=255)                                                                                                                                      ggCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCa          <  8:10408/148‑1 (MQ=255)                                                                                                                                          gTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCa                         >  4:72640/1‑129 (MQ=255)                                                                                                                                          gTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCa                         <  3:72640/129‑1 (MQ=255)                                                                                                                                          gTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCACAAGTAACGCTTATCGGGGCAGCCGCCGATGCAGATGCTCACCACACAGCAAGGCACCACGAAggac      >  6:370960/1‑146 (MQ=255)                                                                                                                                            tCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCg     >  6:177269/1‑147 (MQ=255)                                                                                                                                             ccGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCgaa   <  6:22702/148‑1 (MQ=255)                                                                                                                                              cGCTCGGCCCACATCACCGCCATGGCCGAGGCCGGGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCgaag  <  4:295044/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                GCCGCCACCTGGTTGGTAAAGCTGACCGAACGCGGTGTGCTCACGCCGGTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGG‑C‑TTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAG  >  NC_002947/2780380‑2780668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.