| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 2,958,780 | Δ61 bp | 16.1% | intergenic (+46/+36) | PP_2589 → / ← PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2958779 | 38 (0.650) | 8 (0.140) | 8/250 | NT | 16.1% | intergenic (+45/+97) | PP_2589/PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor |
| ? | NC_002947 | 2958841 = | 47 (0.840) | intergenic (+107/+35) | PP_2589/PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor | |||||
GGGGCAAGCAGTCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACC > NC_002947/2958640‑2958925 | ggggCAAGCAGTCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAg < 5:77845/148‑1 (MQ=255) cAAGCAGTCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCa < 7:1640/149‑1 (MQ=255) cAAGAAGTCGTGGTTTGGCCGCGATCTGTCACTGCATTCGATCGACAAGTATTCTCATCTCAAGCCCACCTGGTACCAGTTTCGCGGCTGATGTTTT‑GATCATTGACCGCGTCGTCTGCTTGGCGGGCATGCCCGCTCCCACAGGTTCa < 6:195079/149‑1 (MQ=255) gCAGTCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGTCAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGca > 3:164547/1‑149 (MQ=255) gTCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACaa < 1:181989/149‑1 (MQ=255) tCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCCCCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAg > 8:283941/1‑149 (MQ=255) gTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGa < 8:232150/149‑1 (MQ=255) gTTTGGCCGCGATCTGTAACTGCATTCGTTCGACAAGTATTCGCAACTCAAGAAGACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGa < 7:244672/149‑1 (MQ=255) tttGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAg < 2:175186/149‑1 (MQ=255) ggCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGt > 3:78281/1‑130 (MQ=255) gCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGtt > 1:30577/1‑149 (MQ=255) tCACTGCATTCGTTCGACAAGTATTCTCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTgaa < 1:42772/146‑3 (MQ=37) tCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttag > 2:35653‑M1/1‑108 (MQ=255) cTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGGATGCCCGCTCCCACAGGTTCAGCACCAGTGGGAGGGATGTGGTGGCCCggtg > 2:155933/1‑149 (MQ=255) ttcgttcgACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGc < 5:58029/149‑1 (MQ=25) cgttcgACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCg < 7:283941/148‑1 (MQ=255) aaGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGccc > 1:35264/1‑149 (MQ=255) gTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagct < 1:35653‑M1/149‑62 (MQ=255) gTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGCCCTGTGGGAGCGGGCGCGCCcgc > 3:360732/1‑149 (MQ=255) gTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCcgc > 2:158235/1‑149 (MQ=255) tATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCtgt < 4:9335/130‑1 (MQ=255) ttCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCcgcg > 6:151193/1‑147 (MQ=255) gCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCcgcgcacag > 7:139830/1‑144 (MQ=255) gCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAagag < 2:30577/149‑1 (MQ=255) aaCTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCCCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTCAGGGTTGTGCTGGACCGGTGGGAGCGGGCGCGCCCGCGAAGAGGc > 3:196453/1‑149 (MQ=255) tCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTgg < 7:210354/114‑1 (MQ=255) tCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCCCCCGCGAAGAGGCCg > 3:233184/1‑148 (MQ=255) aGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggc > 7:137865‑M1/1‑74 (MQ=255) gACCACCTGGTACCAGTTGCGCGGCTGATGTATTGGATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATc > 1:49833/1‑149 (MQ=255) gACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCt > 1:353539/1‑149 (MQ=255) gACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCCCGAAGAGGCCGTATCt > 3:62767/1‑149 (MQ=255) caccTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgccc < 5:298816‑M1/149‑80 (MQ=255) aCCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCACCACAACTCTGAGGTTTGTGCTGGACCAGTGGGAGCGGGCCCGCCCCCGAACAGGCCGTATCATGCGCCgcggc > 8:282561/1‑149 (MQ=38) cgGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGt < 2:49833/149‑1 (MQ=255) gTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGCCGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTc > 8:178066/1‑149 (MQ=255) tATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCGCGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggca > 8:257729‑M1/1‑43 (MQ=255) aTT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGGTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGGGGCCGTATCTGGCGCCGCGGCGGGCCCCGGGTTGCAGTCCa > 3:19092/1‑149 (MQ=37) gATCATTGACCGCGTCGTCTGCTTCGCGGGCGCGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacac < 7:257729‑M1/148‑110 (MQ=255) tCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCCCGc > 5:228343/1‑147 (MQ=255) tCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGc > 2:288813/1‑147 (MQ=255) aTTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGc > 7:209145/1‑149 (MQ=255) gACCGCGTCGTCTGCTTCGCGGGCATGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagta < 8:137865‑M1/148‑117 (MQ=255) gtcTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATa < 5:151193/149‑1 (MQ=255) ttCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCcg > 7:328478/1‑149 (MQ=255) tCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCcgc > 2:58974/1‑149 (MQ=255) gggCATGCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcccccaggttggc < 8:268120‑M1/149‑138 (MQ=255) gCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcccccaggttggcgatgtt < 4:19092‑M1/149‑144 (MQ=255) gCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcc < 6:208130‑M1/132‑127 (MQ=255) gCCCGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcc > 5:208130‑M1/1‑6 (MQ=255) gCCCGCgaagaggccgtatctggcgccgcggcgggaccaggttagaagtccacgctagccgaaagctgataggtccgcggcgcacccaaacccagggtctgggtcaggggcaccccccagtagtccttgtcccccaggttggcgatttt > 5:145411‑M1/1‑6 (MQ=255) cccGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcccccaggttggcgatgttc < 7:178066‑M1/149‑145 (MQ=255) cccGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGGTAGAAGTCCACGGTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCaa > 5:250120/1‑149 (MQ=255) ccGCgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcccccaggttggcgatgttcg > 1:321595‑M1/1‑4 (MQ=255) ccGCgaagaggccgtatctggcgccgcggcgggacccgcttagaactccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcccccagctaggcgatgttc > 1:57267‑M1/1‑4 (MQ=255) ccGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAAc > 8:21590/1‑149 (MQ=255) cgcgaagaggccgtatctggcgccgcggcgggacccggttagaagtccacgctagccgaaagctgataggtccgcggcgcccccaaccccagggtctgggtcagtggcacaccccagtagtccttgtcccccaggttggcgatgttcgc > 3:195874‑M1/1‑3 (MQ=255) | GGGGCAAGCAGTCGGGGTTTGGCCGCGATCTGTCACTGCATTCGTTCGACAAGTATTCGCAACTCAAGACCACCTGGTACCAGTTGCGCGGCTGATGTATT‑GATCATTGACCGCGTCGTCTGCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACC > NC_002947/2958640‑2958925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |